Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2e22
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 36 0.016
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 32 0.15
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 32 0.15
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 32 0.15
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 30 0.81
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 27 4.3
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 27 4.3
Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 27 7.5
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 27 7.5
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 35.5 bits (78), Expect = 0.016
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 78 LCWLWPTLKTQLR*WKTLTQETATNLLTTARTSXILPKITTLMETATNLSTTVHI---TW 248
LC+LW L T T T T T+ + T T+ ++ TT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTT 236
Query: 249 TLPKADLTSSLPLS 290
T+P + T++ PL+
Sbjct: 237 TVPTNETTTTSPLN 250
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 32.3 bits (70), Expect = 0.15
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 VVENADSGNGYEPIDN--RPYIXNPPKDYNPNGNGYEPIDNGAYYVDPP 256
+VE+ D GN P ++ P N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 32.3 bits (70), Expect = 0.15
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 VVENADSGNGYEPIDN--RPYIXNPPKDYNPNGNGYEPIDNGAYYVDPP 256
+VE+ D GN P ++ P N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 32.3 bits (70), Expect = 0.15
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 VVENADSGNGYEPIDN--RPYIXNPPKDYNPNGNGYEPIDNGAYYVDPP 256
+VE+ D GN P ++ P N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 126 TLTQETATNLLTTARTSXILPKITTLMETATNLSTTVHITWTL 254
TL E T ++TT TS + K+ M AT + WTL
Sbjct: 47 TLPYEETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTL 89
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 93 PTLKTQLR*WKTLTQET--ATNLLTTARTSXILPKITTLMETATNLSTTVHITWTLP 257
P + T +R T T T A N+ TT T+ I P T T +TTV T T P
Sbjct: 17 PVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72
>Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical
protein T27E7.1 protein.
Length = 226
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +2
Query: 122 ENADSGNGYEPIDNRPYIXNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PF 289
+N G + P N + N P + GY P PP+G Y++P P+
Sbjct: 34 QNPQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPY 91
Query: 290 PGARGGK 310
+GGK
Sbjct: 92 KPGKGGK 98
>Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical
protein C43F9.4 protein.
Length = 361
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 56 FFXIFVLALLAMANAQD---PVKVVENADSGNGYEPIDNRPYI 175
F+ IF++ ++ M + D P+ +N D N +EP RP+I
Sbjct: 29 FWVIFIVIIVVMTHFNDYSEPIVPWDNCDMNNTWEP-TTRPFI 70
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.5 bits (58), Expect = 4.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 126 TLTQETATNLLTT----ARTSXILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 284
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 497 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 27.5 bits (58), Expect = 4.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 126 TLTQETATNLLTT----ARTSXILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 284
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 338 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 27.5 bits (58), Expect = 4.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 126 TLTQETATNLLTT----ARTSXILPKITTLMETATNLSTTVHITWTLP-KADLTSSLP 284
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 378 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical
protein K02B12.2 protein.
Length = 196
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 180 ILPKITTLMETATNLSTTVHITWTLPKAD 266
I+ TT +++ T+LS + TW LPK D
Sbjct: 19 IVNHYTTHVKSTTDLSKCGNCTWVLPKLD 47
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 146 YEPIDNRPYIXNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 286
Y+P + P P P GY P G YY QG PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 209 NGYEPIDNGAYYVDPPQGRPYFKPTPFPGA 298
NGY +NG +P Q P P+ FPGA
Sbjct: 1146 NGYPNNNNGGAIGNPQQMLPPRDPSAFPGA 1175
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 120 WKTLTQETATNLLTTARTSXILPKITTLMETATNLSTTVHITWT 251
WK T TT + PK TTL +T T +T+ T T
Sbjct: 134 WKKFTTTEEPLETTTTKRIITTPKRTTLRKTTTTTTTSTTSTST 177
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 126 TLTQETATNLLTTARTSXIL-PKITTLMETATNLSTTVHITWTLP 257
T T T T TT T I+ P + T STT + +TLP
Sbjct: 420 TTTTTTTTEAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLP 464
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 126 TLTQETATNLLTTARTSXIL-PKITTLMETATNLSTTVHITWTLP 257
T T T T TT T I+ P + T STT + +TLP
Sbjct: 420 TTTTTTTTEAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLP 464
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 77 ALLAMANAQDPVKVVE-NADSGNGYEPIDNRPYIXNPPKDYNPNGNGYEPI 226
A++ A++ D V+++E ADS G P+ PY P + NP +E +
Sbjct: 830 AMVMCASSPDKVEIMEVPADSKPG-TPVVCPPYTHRPDEQLNPKKKIWETV 879
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 146 YEPIDNRPYIXN--PPKDYNPNGNGYEPIDNGAYYVDPP 256
Y P PY PP +N G+G GAY+ PP
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPP 45
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 146 YEPIDNRPYIXN--PPKDYNPNGNGYEPIDNGAYYVDPP 256
Y P PY PP +N G+G GAY+ PP
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPP 45
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 131 DSGNGYEPIDNRPYIXNPPKDYNPNGNGY--EPIDNGAYY---VDPPQ 259
D+ N Y+P++ + NP K + NG+ + + + A Y VDPP+
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPK 871
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,775,119
Number of Sequences: 27780
Number of extensions: 187691
Number of successful extensions: 516
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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