Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e21
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-P...   160   2e-39
AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-P...   150   2e-36
AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p pro...   148   6e-36

>AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-PB,
           isoform B protein.
          Length = 140

 Score =  160 bits (388), Expect = 2e-39
 Identities = 79/140 (56%), Positives = 92/140 (65%)
 Frame = +2

Query: 116 MLEITDTQKIGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFF 295
           M+EI+D QKIG+GLA                    AIGNILFISGL CVIG++RT  FFF
Sbjct: 1   MIEISDLQKIGIGLAGFGIFFLFLGMLLLFDKGLLAIGNILFISGLACVIGVERTMRFFF 60

Query: 296 QRHKLKASVAFFSGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLN 475
           QRHK+K + AF  GI IVLLG+P+ GMI E YGF  LF GF P AINFL  VPVLGSL N
Sbjct: 61  QRHKVKGTTAFLGGIVIVLLGFPIFGMIIESYGFFALFSGFFPVAINFLGRVPVLGSLFN 120

Query: 476 LPIIRGIVDRIAGNNGRNMV 535
           LP I+ IV ++ G+  R  V
Sbjct: 121 LPFIQKIVQKLGGDGNRTTV 140


>AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-PA,
           isoform A protein.
          Length = 128

 Score =  150 bits (364), Expect = 2e-36
 Identities = 74/127 (58%), Positives = 85/127 (66%)
 Frame = +2

Query: 116 MLEITDTQKIGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFF 295
           M+EI+D QKIG+GLA                    AIGNILFISGL CVIG++RT  FFF
Sbjct: 1   MIEISDLQKIGIGLAGFGIFFLFLGMLLLFDKGLLAIGNILFISGLACVIGVERTMRFFF 60

Query: 296 QRHKLKASVAFFSGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLN 475
           QRHK+K + AF  GI IVLLG+P+ GMI E YGF  LF GF P AINFL  VPVLGSL N
Sbjct: 61  QRHKVKGTTAFLGGIVIVLLGFPIFGMIIESYGFFALFSGFFPVAINFLGRVPVLGSLFN 120

Query: 476 LPIIRGI 496
           LP I+ +
Sbjct: 121 LPFIQKV 127


>AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p
           protein.
          Length = 128

 Score =  148 bits (359), Expect = 6e-36
 Identities = 73/127 (57%), Positives = 84/127 (66%)
 Frame = +2

Query: 116 MLEITDTQKIGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFF 295
           M+EI+D QKIG+GLA                    AIGNILFISGL CVIG++R   FFF
Sbjct: 1   MIEISDLQKIGIGLAGFGIFFLFLGMLLLFDKGLLAIGNILFISGLACVIGVERAMRFFF 60

Query: 296 QRHKLKASVAFFSGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLN 475
           QRHK+K + AF  GI IVLLG+P+ GMI E YGF  LF GF P AINFL  VPVLGSL N
Sbjct: 61  QRHKVKGTTAFLGGIVIVLLGFPIFGMIIESYGFFALFSGFFPVAINFLGRVPVLGSLFN 120

Query: 476 LPIIRGI 496
           LP I+ +
Sbjct: 121 LPFIQKV 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,288,978
Number of Sequences: 53049
Number of extensions: 615820
Number of successful extensions: 2233
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)