Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e17
         (445 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    27   0.30 
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   8.5  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 0.30
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -3

Query: 221 NLDPKLSDLYLSRSAEIESSGK 156
           +L P+L DLY++R+ E+E + K
Sbjct: 34  DLKPQLRDLYITRAREVEFNNK 55


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 46  WRI*RTNFAFYVLLKTSKMKTIYFVLLISV 135
           W +   N    V+ + S+    YF LL+++
Sbjct: 580 WTVLTCNVPHEVVFRASRSNNFYFALLLTM 609


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,062
Number of Sequences: 2352
Number of extensions: 2761
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)