Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e15
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   1.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   1.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   7.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   7.6  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 87  IRC*CFSTRRDGGCGGRNISLYLVARKEGSPTARSSRRESA 209
           + C  +S R   G   R   +     K+G+PTA   R  +A
Sbjct: 194 VYCTRYSDRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTA 234


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 155 QVKRNVPTATTAIAPSAK 102
           QVKRNVP  T    P A+
Sbjct: 201 QVKRNVPKPTVPKIPPAE 218


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 276 CTRKYYFANKIIFPLHYVLLL 214
           C++K +  N  IF L+ VLLL
Sbjct: 108 CSKKSFRMNFAIFNLYMVLLL 128


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 155 QVKRNVPTATTAIAPSAK 102
           QVKRNVP  T    P A+
Sbjct: 201 QVKRNVPKPTVPKIPPAE 218


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 184 AVGEPSFLATK*REMFRPPQPPS 116
           +V EP+   T   E  RPP  PS
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPS 420


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 241 FSAALCSATIFADSRLE 191
           F  A+C+ T+FA  + E
Sbjct: 9   FILAICACTVFAQQQAE 25


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 267  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 175
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 267  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 175
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -3

Query: 314 IYNIILLDSKHKRVHV----SIILRTKLFFRCTMFCYY 213
           ++ + LL S +  VH+      I+ T  F  CT + YY
Sbjct: 68  VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYY 105


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 155 QVKRNVPTAT 126
           QVKRNVP  T
Sbjct: 201 QVKRNVPKPT 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,152
Number of Sequences: 336
Number of extensions: 1578
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)