Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e13
         (211 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q99KB8 Cluster: Hydroxyacylglutathione hydrolase; n=35;...    54   8e-07
UniRef50_Q16775 Cluster: Hydroxyacylglutathione hydrolase; n=15;...    53   1e-06
UniRef50_Q1HQH9 Cluster: Glyoxylase 3; n=3; Endopterygota|Rep: G...    42   0.004
UniRef50_Q9JIL1 Cluster: Rsp29-like protein; n=1; Mus musculus|R...    40   0.015
UniRef50_O94250 Cluster: Hydroxyacylglutathione hydrolase; n=1; ...    39   0.019
UniRef50_A2R427 Cluster: Function: RSP29 precursor; n=20; Ascomy...    36   0.18 
UniRef50_A6NCC4 Cluster: Uncharacterized protein HAGHL; n=24; Eu...    33   0.96 
UniRef50_Q4YP61 Cluster: Putative uncharacterized protein; n=1; ...    31   3.9  
UniRef50_Q8YZ99 Cluster: All0580 protein; n=6; Cyanobacteria|Rep...    31   6.8  
UniRef50_A1SS88 Cluster: Hydroxyacylglutathione hydrolase; n=2; ...    31   6.8  
UniRef50_A0C344 Cluster: Chromosome undetermined scaffold_146, w...    31   6.8  

>UniRef50_Q99KB8 Cluster: Hydroxyacylglutathione hydrolase; n=35;
           Eukaryota|Rep: Hydroxyacylglutathione hydrolase - Mus
           musculus (Mouse)
          Length = 260

 Score = 53.6 bits (123), Expect = 8e-07
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKDTFK 105
           NPFMRV E  VQ H G+ DP+ TM+AIR EKD FK
Sbjct: 222 NPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 256


>UniRef50_Q16775 Cluster: Hydroxyacylglutathione hydrolase; n=15;
           Eukaryota|Rep: Hydroxyacylglutathione hydrolase - Homo
           sapiens (Human)
          Length = 260

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKDTFK 105
           NPFMRV E  VQ H G+ DP+ TM+A+R EKD FK
Sbjct: 222 NPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFK 256


>UniRef50_Q1HQH9 Cluster: Glyoxylase 3; n=3; Endopterygota|Rep:
           Glyoxylase 3 - Aedes aegypti (Yellowfever mosquito)
          Length = 302

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKDTF 102
           N FMRV E +VQ   GK+ P++TM+A+R  KD F
Sbjct: 269 NVFMRVHEASVQKFVGKSTPLETMQALRAAKDKF 302


>UniRef50_Q9JIL1 Cluster: Rsp29-like protein; n=1; Mus musculus|Rep:
           Rsp29-like protein - Mus musculus (Mouse)
          Length = 56

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 31  VQNHTGKNDPIDTMKAIRLEKDTFK 105
           VQ H G+ DP+ TM+AIR EKD FK
Sbjct: 28  VQQHAGETDPVTTMRAIRREKDQFK 52


>UniRef50_O94250 Cluster: Hydroxyacylglutathione hydrolase; n=1;
           Schizosaccharomyces pombe|Rep: Hydroxyacylglutathione
           hydrolase - Schizosaccharomyces pombe (Fission yeast)
          Length = 256

 Score = 39.1 bits (87), Expect = 0.019
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKD 96
           NPFMRVT+  +Q H G NDPI  M  +R  K+
Sbjct: 223 NPFMRVTDPELQKHLGLNDPIKVMDELRTLKN 254


>UniRef50_A2R427 Cluster: Function: RSP29 precursor; n=20;
           Ascomycota|Rep: Function: RSP29 precursor - Aspergillus
           niger
          Length = 299

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKD 96
           N FMRV +  +Q  TGK DP++ M A+R  K+
Sbjct: 266 NVFMRVNDPEIQKKTGKTDPVEVMAALREMKN 297


>UniRef50_A6NCC4 Cluster: Uncharacterized protein HAGHL; n=24;
           Euteleostomi|Rep: Uncharacterized protein HAGHL - Homo
           sapiens (Human)
          Length = 291

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKDTFK 105
           NPF+RV E  V+  TGK  P D ++A+  E+  F+
Sbjct: 230 NPFLRVAEEPVRKFTGKAVPADVLEALCKERARFE 264


>UniRef50_Q4YP61 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 38

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 110 SLFIQIKKTVAFLEHILVFIFVYSINCFLLLKK 208
           SLFI +     F++H L+F + Y I  F+L KK
Sbjct: 3   SLFISVNVIYIFIQHFLLFKYKYYIYNFILYKK 35


>UniRef50_Q8YZ99 Cluster: All0580 protein; n=6; Cyanobacteria|Rep:
           All0580 protein - Anabaena sp. (strain PCC 7120)
          Length = 257

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKDTF 102
           NPF+R  + ++Q     NDP+ T   IR  KD F
Sbjct: 224 NPFLRWEQPSLQLAVNSNDPVQTFARIRGLKDKF 257


>UniRef50_A1SS88 Cluster: Hydroxyacylglutathione hydrolase; n=2;
           Psychromonas|Rep: Hydroxyacylglutathione hydrolase -
           Psychromonas ingrahamii (strain 37)
          Length = 256

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +1

Query: 1   NPFMRVTELAV----QNHTGK--NDPIDTMKAIRLEKDTF 102
           NPF+R  +  V    Q+H GK  NDP+    A+R  KD F
Sbjct: 217 NPFLRCQQQTVINKLQSHLGKELNDPLSCFSALRQYKDNF 256


>UniRef50_A0C344 Cluster: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 141

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 210 FFFNKRKQFIEYTK--INTNICSRNATVFFICIKRDLLKCIFF*PYCFHSINRII 52
           F   +   F+++ K  I   IC +   V    +++ L+   F  P+CF+S+N +I
Sbjct: 25  FQLYRHLHFVQFQKDQIELQICPKKLQVQLKNLEKSLIASAFDSPHCFYSLNALI 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,885,849
Number of Sequences: 1657284
Number of extensions: 3005678
Number of successful extensions: 7302
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7299
length of database: 575,637,011
effective HSP length: 48
effective length of database: 496,087,379
effective search space used: 10417834959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)