Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2e13
(211 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 39 8e-05
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 29 0.11
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 3.2
SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S... 23 5.5
SPAP27G11.16 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 7.3
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 23 7.3
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 22 9.6
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 22 9.6
SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 22 9.6
SPBC1A4.01 |apc10|SPBC1E8.06|anaphase-promoting complex subunit ... 22 9.6
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 22 9.6
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz... 22 9.6
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 39.1 bits (87), Expect = 8e-05
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 1 NPFMRVTELAVQNHTGKNDPIDTMKAIRLEKD 96
NPFMRVT+ +Q H G NDPI M +R K+
Sbjct: 223 NPFMRVTDPELQKHLGLNDPIKVMDELRTLKN 254
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 28.7 bits (61), Expect = 0.11
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 1 NPFMRVTELAVQNHTGKNDPIDTMKAIR 84
NPFM + +VQ G +DPI MK +R
Sbjct: 223 NPFMCLGLESVQKAVGSSDPITVMKKLR 250
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 95 IHLSKSLFIQIKKTVA-FLEHILVFIFVYSINCFLLL 202
I LS+ + ++ K+ LEH+L ++ +NC+ LL
Sbjct: 385 IFLSRFILLRKKEDCKKLLEHVLPIRQLFLLNCYSLL 421
>SPCC188.02 |par1||protein phosphatase regulatory subunit Par1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 548
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 25 LAVQNHTGKNDPIDTMKAIRLE 90
L V H+GK PIDT R E
Sbjct: 58 LTVPKHSGKKVPIDTTPTPRDE 79
>SPAP27G11.16 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 104
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 165 NTNICSRNATVFFIC 121
NTN R+++VFF C
Sbjct: 18 NTNFTERSSSVFFEC 32
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 19 TELAVQNHTGKNDPIDTMKAIRLEKDTF 102
++L TG+N P+DT++ + TF
Sbjct: 113 SQLYTTTITGQNTPVDTVEVVIPTAGTF 140
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 81 YCFHSINRIIF 49
YCF ++N IIF
Sbjct: 211 YCFENVNSIIF 221
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 192 KQFIEYTKINTNICSR 145
K+ IEY K+ N+C++
Sbjct: 41 KEPIEYVKLRENLCTK 56
>SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 22.2 bits (45), Expect = 9.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2
Query: 164 FIFVYSINCFLLL 202
F+F Y +NCF ++
Sbjct: 80 FVFGYIVNCFFII 92
>SPBC1A4.01 |apc10|SPBC1E8.06|anaphase-promoting complex subunit
Apc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 189
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 158 IYAPEMQQFFLFV*KEIYLNVSFSSR 81
IYAPE++Q + V + Y ++ F SR
Sbjct: 160 IYAPEIEQPAIAVDEIPYTSLQFISR 185
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 22.2 bits (45), Expect = 9.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 207 FFNKRKQFIEYTKI 166
+F+K K FIEY+ I
Sbjct: 268 YFSKLKMFIEYSNI 281
>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 702
Score = 22.2 bits (45), Expect = 9.6
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +3
Query: 147 WSIYWCLFLYI 179
W+I WC+F ++
Sbjct: 377 WNINWCIFNFV 387
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,812
Number of Sequences: 5004
Number of extensions: 14984
Number of successful extensions: 39
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 2,362,478
effective HSP length: 49
effective length of database: 2,117,282
effective search space used: 42345640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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