Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e13
         (211 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061337-1|AAL28885.1|  305|Drosophila melanogaster LD26447p pro...    46   1e-05
AE014296-3422|AAG22178.1|  271|Drosophila melanogaster CG4365-PB...    46   1e-05
AE014296-3421|AAF51642.2|  305|Drosophila melanogaster CG4365-PA...    46   1e-05
AE014296-3420|AAN12145.1|  348|Drosophila melanogaster CG4365-PC...    46   1e-05
AY051443-1|AAK92867.1|  697|Drosophila melanogaster GH11385p pro...    27   4.7  
AE014297-2287|AAF55373.2|  697|Drosophila melanogaster CG8913-PA...    27   4.7  
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB...    26   8.3  

>AY061337-1|AAL28885.1|  305|Drosophila melanogaster LD26447p
           protein.
          Length = 305

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTG-KNDPIDTMKAIRLEKDTFK 105
           NPFMRV E  VQ H G   DP+ TM  +R EKDTFK
Sbjct: 269 NPFMRVHEATVQKHAGGATDPVVTMGKLRKEKDTFK 304


>AE014296-3422|AAG22178.1|  271|Drosophila melanogaster CG4365-PB,
           isoform B protein.
          Length = 271

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTG-KNDPIDTMKAIRLEKDTFK 105
           NPFMRV E  VQ H G   DP+ TM  +R EKDTFK
Sbjct: 235 NPFMRVHEATVQKHAGGATDPVVTMGKLRKEKDTFK 270


>AE014296-3421|AAF51642.2|  305|Drosophila melanogaster CG4365-PA,
           isoform A protein.
          Length = 305

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTG-KNDPIDTMKAIRLEKDTFK 105
           NPFMRV E  VQ H G   DP+ TM  +R EKDTFK
Sbjct: 269 NPFMRVHEATVQKHAGGATDPVVTMGKLRKEKDTFK 304


>AE014296-3420|AAN12145.1|  348|Drosophila melanogaster CG4365-PC,
           isoform C protein.
          Length = 348

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   NPFMRVTELAVQNHTG-KNDPIDTMKAIRLEKDTFK 105
           NPFMRV E  VQ H G   DP+ TM  +R EKDTFK
Sbjct: 312 NPFMRVHEATVQKHAGGATDPVVTMGKLRKEKDTFK 347


>AY051443-1|AAK92867.1|  697|Drosophila melanogaster GH11385p
           protein.
          Length = 697

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 209 FFLIKENNLLNIQK*TPIYAPEMQQFFLFV*KEI 108
           +F +  N LLN+ K   +Y  E    ++F+ KE+
Sbjct: 459 YFSMLPNELLNLTKDNVVYGTEKNNQYVFISKEL 492


>AE014297-2287|AAF55373.2|  697|Drosophila melanogaster CG8913-PA
           protein.
          Length = 697

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 209 FFLIKENNLLNIQK*TPIYAPEMQQFFLFV*KEI 108
           +F +  N LLN+ K   +Y  E    ++F+ KE+
Sbjct: 459 YFSMLPNELLNLTKDNVVYGTEKNNQYVFISKEL 492


>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
            protein.
          Length = 2893

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 130  KNCCISGAYIGVYFCIFNKLFSFI 201
            +NCC+S     ++F IF  +  F+
Sbjct: 2383 RNCCVSSVIAPIFFVIFVLMAQFV 2406


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,348,006
Number of Sequences: 53049
Number of extensions: 130728
Number of successful extensions: 235
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 24,988,368
effective HSP length: 49
effective length of database: 22,388,967
effective search space used: 447779340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)