Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2e10
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 30 1.4
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 30 1.4
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.8
U85766-1|AAD00574.1| 216|Caenorhabditis elegans EGL-17 protein. 28 5.8
AC006635-3|AAK68384.1| 216|Caenorhabditis elegans Egg laying de... 28 5.8
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 28 5.8
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 28 5.8
Z75543-5|CAA99872.2| 270|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 185 DIFGNKEPNFGNSEDKTLKYTPPKPQISP 271
D +GN+ +G+S + Y PP+P SP
Sbjct: 65 DQYGNRGSQYGSSYGRPSSYGPPQPSYSP 93
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical protein
F56C9.10b protein.
Length = 1031
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 128 ENDDFDDDFFTPVASTTLADIFGNKEPNFGNSEDKTLKYTPPKPQISPKPV-DTKQTQ 298
+NDD ++FF +ST A + G + K+LK P +P P TK +Q
Sbjct: 948 KNDDLIEEFFDTESSTPFARNGSGSSSSTGATGGKSLKKKKTPPASAPLPTSSTKSSQ 1005
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical protein
F56C9.10a protein.
Length = 1028
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 128 ENDDFDDDFFTPVASTTLADIFGNKEPNFGNSEDKTLKYTPPKPQISPKPV-DTKQTQ 298
+NDD ++FF +ST A + G + K+LK P +P P TK +Q
Sbjct: 945 KNDDLIEEFFDTESSTPFARNGSGSSSSTGATGGKSLKKKKTPPASAPLPTSSTKSSQ 1002
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
K04B12.1 protein.
Length = 1764
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 329 EWTQNAYVLKGKVGFAIIKQTIGEIHNIVLYDSNKTTLSSTIV 457
+W N YVL+ F Q + ++ + + D+N +T++ T++
Sbjct: 1596 QWKANGYVLRVWANFVRNPQLVFDVPHSISMDANLSTVAQTMM 1638
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 164 VASTTLADIFGNKEPNFGNSEDKTLKYTPPKP--QISPKPVDTKQTQCVYACALTAYEWT 337
V T ++ G FGN ++KY P KP Q++ + + C C L E
Sbjct: 600 VCGATSSNCLGFTREEFGNKICSSIKYDPHKPDQQLTGEGFEHSTQPCRVWCHLIGSELI 659
Query: 338 QN 343
+N
Sbjct: 660 RN 661
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 164 VASTTLADIFGNKEPNFGNSEDKTLKYTPPKP--QISPKPVDTKQTQCVYACALTAYEWT 337
V T ++ G FGN ++KY P KP Q++ + + C C L E
Sbjct: 600 VCGATSSNCLGFTREEFGNKICSSIKYDPHKPDQQLTGEGFEHSTQPCRVWCHLIGSELI 659
Query: 338 QN 343
+N
Sbjct: 660 RN 661
>U85766-1|AAD00574.1| 216|Caenorhabditis elegans EGL-17 protein.
Length = 216
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 227 DKTLKYTPPKPQISPKPVD 283
+K++ TPPKP++SP P++
Sbjct: 165 EKSVCSTPPKPKLSPSPLE 183
>AC006635-3|AAK68384.1| 216|Caenorhabditis elegans Egg laying
defective protein 17 protein.
Length = 216
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 227 DKTLKYTPPKPQISPKPVD 283
+K++ TPPKP++SP P++
Sbjct: 165 EKSVCSTPPKPKLSPSPLE 183
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 329 EWTQNAYVLKGKVGFAIIKQTIGEIHNIVLYDSNKTTLSSTIV 457
+W N YVL+ F Q + ++ + + D+N +T++ T++
Sbjct: 1598 QWKANGYVLRVWANFVRNPQLVFDVPHSISMDANLSTVAQTMM 1640
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 164 VASTTLADIFGNKEPNFGNSEDKTLKYTPPKP--QISPKPVDTKQTQCVYACALTAYEWT 337
V T ++ G FGN ++KY P KP Q++ + + C C L E
Sbjct: 600 VCGATSSNCLGFTREEFGNKICSSIKYDPHKPDQQLTGEGFEHSTQPCRVWCHLIGSELI 659
Query: 338 QN 343
+N
Sbjct: 660 RN 661
>Z75543-5|CAA99872.2| 270|Caenorhabditis elegans Hypothetical
protein K01D12.5 protein.
Length = 270
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 194 GNKEPNFGNSEDKTLKYTPPKPQISPKPVDTKQTQCVYACALT 322
G+ + GNSE P P ++P PV + Q Y+ A T
Sbjct: 111 GSNVVSGGNSESYGYNQQAPVPTVAPAPVHFSERQRSYSAAPT 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,730,500
Number of Sequences: 27780
Number of extensions: 256566
Number of successful extensions: 754
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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