Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2e09
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical pr... 264 7e-71
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 30 2.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 2.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 2.2
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 29 5.1
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 29 5.1
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 29 5.1
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 29 5.1
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 28 6.7
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical ... 28 6.7
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 28 6.7
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 28 6.7
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical
protein C47E12.1 protein.
Length = 487
Score = 264 bits (646), Expect = 7e-71
Identities = 129/231 (55%), Positives = 161/231 (69%)
Frame = +1
Query: 103 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 282
MVLD+D+FR +K GNP+ IR++Q+ RFKD LVD V+E D WRK R AD N+ KN
Sbjct: 1 MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAI 60
Query: 283 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 462
SK IG KMK KEP G++D V +I L L D L LTV Q+KK+RVL+D +
Sbjct: 61 SKAIGEKMKKKEPQGTDDS-VADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTA 119
Query: 463 EGLLAAEKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDG 642
++A E AR L ++GN +H SV V DE +N +ERT GD +KKYSHVDL+ M+DG
Sbjct: 120 AAVIANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDG 179
Query: 643 MDGERGSAVAGGRGYYLKGPAVFLEQALVQLSLRMLLEKGYTPLYTPFFMR 795
DGERG+ VAGGRGY+LKGP VFLEQA++QL+L+ L KGY PLYTPFFMR
Sbjct: 180 FDGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMR 230
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
ZC434.5 protein.
Length = 1149
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +1
Query: 214 EQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIA 360
+Q L R+L+ + + K+ +K + LK + K+ +GS+ +P P+++A
Sbjct: 1023 DQALLVRELKMKDAKSQETKDAIAKLLQLKKQYKDATGSDYKPAPAQLA 1071
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 451 SKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNL 567
S + +GL+ AE+A+ + + N+ + P+D+ ED +L
Sbjct: 171 SPDYKGLMTAEQAKEDFMNRIENYKKQYEPLDESEDESL 209
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 130 ADKDGNPDKIR-ENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKL--KNVCSKEIGL 300
A K + +K++ E QKK+ ++AL++ EQ+ L ++ D K K E
Sbjct: 13563 ATKKADAEKLKLEEQKKKAAEIALIEIQKEQEKLAQEQSRLEDEAKKSAEKQKLESETKS 13622
Query: 301 KMKNKEPSGSEDE 339
K + P S DE
Sbjct: 13623 KQTEEAPKESVDE 13635
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 130 ADKDGNPDKIR-ENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKL--KNVCSKEIGL 300
A K + +K++ E QKK+ ++AL++ EQ+ L ++ D K K E
Sbjct: 13563 ATKKADAEKLKLEEQKKKAAEIALIEIQKEQEKLAQEQSRLEDEAKKSAEKQKLESETKS 13622
Query: 301 KMKNKEPSGSEDE 339
K + P S DE
Sbjct: 13623 KQTEEAPKESVDE 13635
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 754 QVTFLEKVERGLVLGILQDLSDNN 683
Q+T +K GLVLG +D++D+N
Sbjct: 827 QITVRQKTSIGLVLGFTEDINDDN 850
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 343 VPSEIANNLVNLTGDNLKPLTVN 411
VP+ N +N TGD L P TVN
Sbjct: 444 VPANFVANQINHTGDGLSPWTVN 466
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 313 KEPSGSEDEPVPSEIANNLVNLTGDNLKPL--TVNQIKKVRVLIDNAISKNDEGLLAAEK 486
K+P+G ++ E A + N+T KPL V ++ + +++ + N + AE
Sbjct: 563 KKPTGEPEQIKEEEAAEKISNITISKTKPLKKAVTKVSAAKKILNKKLKVNTKKTFGAED 622
Query: 487 ARSAALRE 510
L E
Sbjct: 623 DELEELEE 630
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 451 SKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNL 567
S + +G+++ E+A+ L+ + N+ + P+D+D D L
Sbjct: 172 SPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDHDEEL 210
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 451 SKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNL 567
S + +G+++ E+A+ L+ + N+ + P+D+D D L
Sbjct: 178 SPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDHDEEL 216
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 130 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 258
+ K +P +I ++Q DV D +VEQD K RH ++N
Sbjct: 767 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 807
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 130 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 258
+ K +P +I ++Q DV D +VEQD K RH ++N
Sbjct: 764 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 804
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -2
Query: 600 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 472
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -2
Query: 600 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 472
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +1
Query: 145 NPDKIRE---NQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNK 315
N D+I E NQK +D+ LVD V + +T + ++H+ + + + K
Sbjct: 31 NIDEIMEDDVNQKDEDEDLNLVDRVSKLETNFVFIQHQLSSIMNHLHAPQCKCTTCSKVN 90
Query: 316 EPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDE 465
+P E + S ++ N + LK T+ + K+ L + K+ +
Sbjct: 91 QPGAEEQKNDTSVLSQLFPNASDQQLK--TLLDLSKMNKLPSQVVHKDQQ 138
>AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical
protein Y53F4B.3 protein.
Length = 179
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/114 (24%), Positives = 47/114 (41%)
Frame = +1
Query: 301 KMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAA 480
K K P E EI ++ L L PL ++KKV + + N+E L
Sbjct: 6 KTKKAAPIAQMSEEDVREIEEHVEELVRSQL-PL--GRVKKVVRMNPDVEMLNNEALQLM 62
Query: 481 EKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDG 642
KA ++E+ N +++ + E V+ D D +K ++ L +DG
Sbjct: 63 AKAAELFIKELSNAANQNAAL---EKRKTVQTKDIDKAIKKTWAFAFLEDALDG 113
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -2
Query: 600 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 472
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -2
Query: 600 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 472
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 169 DFLEFYLDYRLYRHEISLSRGPC 101
DF E+Y D R Y +EI G C
Sbjct: 206 DFYEYYFDLRRYNNEICAFSGVC 228
>AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical
protein C36C9.5 protein.
Length = 484
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 127 RADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC-SKEIGLK 303
RA+ P+++ KKR KD+ + +V ++K EA NK C K IG++
Sbjct: 39 RANARTEPNRV----KKRKKDLIAPEPLVPGTEAYKKRWDEAVQNNKTCKACQDKYIGVR 94
Query: 304 MKNKEPSGSEDEPVPSEIANNL 369
P + D P+P + L
Sbjct: 95 TSLFNP--NSDIPIPQPVPQPL 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,256
Number of Sequences: 27780
Number of extensions: 368146
Number of successful extensions: 1360
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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