Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e06
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.2  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   3.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.3  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    22   5.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 237 MASMNIVPYHMSPYGHPYQ 255


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 69  MASMNIVPYHMSPYGHPYQ 87


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 206 LSRRSFLPYHTFPYRLPFQ 262
           ++  + +PYH  PY  P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 639 MKDWDLNGLRTNREWEQG*EDRA 571
           ++++  NGL  + E+ +G +DRA
Sbjct: 627 LREFQFNGLDVDWEYPRGADDRA 649


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 116  QGSTSTMFGRPTR*RSVPLASHNYGP 193
            QGS+S+  G P +  +VP  S + GP
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGP 1120


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +3

Query: 351 WSPALTISKVLLSICSLLCDPNPDDPLV 434
           WSPA T +            P P DP V
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDPSV 135


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 262 NHQKLHSQHVFII 300
           N+Q +H +H+FI+
Sbjct: 44  NNQPVHDEHLFIV 56


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 262 NHQKLHSQHVFII 300
           N+Q +H +H+FI+
Sbjct: 44  NNQPVHDEHLFIV 56


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 262 NHQKLHSQHVFII 300
           N+Q +H +H+FI+
Sbjct: 44  NNQPVHDEHLFIV 56


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 438 EIARIYKTDREKYNELAREWT 500
           +I +IY  + EKY +   E+T
Sbjct: 153 QIRQIYHQELEKYEQACNEFT 173


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 627 DLNGLRTNREWEQ 589
           +LNGLR  +EW++
Sbjct: 461 ELNGLRDFQEWKE 473


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 627 DLNGLRTNREWEQ 589
           +LNGLR  +EW++
Sbjct: 468 ELNGLRDFQEWKE 480


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,093
Number of Sequences: 336
Number of extensions: 4686
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)