Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e06
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             26   1.3  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   4.1  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   4.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   9.4  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +3

Query: 243 PTDYPFKPP-KVAFTTRI 293
           PTDY +KPP K+  TT++
Sbjct: 390 PTDYSYKPPAKITVTTQM 407


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 263 FERVVCREMYGKEENSSLIRTVNWAHNCGLPMEQIF 156
           F ++VC   YG+EE+   +  +N+     L  EQI+
Sbjct: 54  FGQIVCSFRYGREEDE--VMGLNFQKELCLASEQIY 87


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 263 FERVVCREMYGKEENSSLIRTVNWAHNCGLPMEQIF 156
           F ++VC   YG+EE+   +  +N+     L  EQI+
Sbjct: 54  FGQIVCSFRYGREEDE--VMGLNFQKELCLASEQIY 87


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 571 PGCGDVCVYVLLMSQLTHHMAYFL 500
           P    +C+YV+  S L  H A+ L
Sbjct: 120 PRLSRLCIYVVFCSALLSHNAFVL 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,358
Number of Sequences: 2352
Number of extensions: 20154
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)