Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2e01
         (574 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4MR03 Cluster: YitT family protein, putative; n=10; Ba...    33   3.6  
UniRef50_O97316 Cluster: Putative uncharacterized protein MAL3P7...    33   6.3  

>UniRef50_Q4MR03 Cluster: YitT family protein, putative; n=10;
           Bacillus cereus group|Rep: YitT family protein, putative
           - Bacillus cereus G9241
          Length = 297

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 34  IYLFQIILLCMSHFYNGYLNTFL-VYIVAIST 126
           I+L  I LL +SHFY G   TFL  Y VAIS+
Sbjct: 79  IFLLNIPLLILSHFYLGKKTTFLTAYFVAISS 110


>UniRef50_O97316 Cluster: Putative uncharacterized protein MAL3P7.23;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P7.23 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1319

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
 Frame = +1

Query: 1    IFYHSFVSRRYIY-LFQIILLCMSHFYN----GYLNTFLVYIVAISTP*RITL*ATIARN 165
            IF  S +  RY++ LF +  + + H +     GY++  +V ++  S P R+   + I+  
Sbjct: 1216 IFSFSHIPTRYLFFLFGLFFIYLLHVFEFRRLGYMSMPVVTLIVCSLP-RLNYLSNIS-- 1272

Query: 166  IFFSIFIKGWICTYKVVNLL*AKLFKYTI 252
              FS  +  WIC +    +L   +  YTI
Sbjct: 1273 -LFSFALSIWICLFLFKIILSIMIVSYTI 1300


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,489,002
Number of Sequences: 1657284
Number of extensions: 8398770
Number of successful extensions: 17254
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17247
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)