Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2d20
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine phosph... 31 3.7
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph... 31 3.7
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein. 31 3.7
BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein. 31 3.7
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 31 3.7
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph... 31 3.7
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph... 31 3.7
U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kin... 30 8.6
U35835-1|AAA79184.1| 930|Homo sapiens DNA-PK protein. 30 8.6
U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kin... 30 8.6
AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase, DNA-act... 30 8.6
AY030284-1|AAK40350.1| 879|Homo sapiens DNA-dependent protein k... 30 8.6
AB208860-1|BAD92097.1| 726|Homo sapiens protein kinase, DNA-act... 30 8.6
>BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 577
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 510 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 548
>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 1636
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 1569 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1607
>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
Length = 1320
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 1253 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1291
>BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein.
Length = 619
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 552 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 590
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 923 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 961
>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
TD14 protein.
Length = 1636
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 1569 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1607
>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
HD-PTP protein.
Length = 1636
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 175 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 56
SS PPS S+ +LAS+T + D LR K ++K+ N L+
Sbjct: 1569 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1607
>U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kinase
catalytic subunit protein.
Length = 4128
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 214 FSSYSSAVNIAKESSAPPSWSMRILASV----TSLIRASDLQLRKK 89
F S AV A+E + PPSWS A V +L D QLRK+
Sbjct: 3382 FQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKE 3427
>U35835-1|AAA79184.1| 930|Homo sapiens DNA-PK protein.
Length = 930
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 214 FSSYSSAVNIAKESSAPPSWSMRILASV----TSLIRASDLQLRKK 89
F S AV A+E + PPSWS A V +L D QLRK+
Sbjct: 184 FQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKE 229
>U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kinase
catalytic subunit protein.
Length = 4097
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 214 FSSYSSAVNIAKESSAPPSWSMRILASV----TSLIRASDLQLRKK 89
F S AV A+E + PPSWS A V +L D QLRK+
Sbjct: 3382 FQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKE 3427
>AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase,
DNA-activated, catalytic polypeptide protein.
Length = 4128
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 214 FSSYSSAVNIAKESSAPPSWSMRILASV----TSLIRASDLQLRKK 89
F S AV A+E + PPSWS A V +L D QLRK+
Sbjct: 3382 FQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKE 3427
>AY030284-1|AAK40350.1| 879|Homo sapiens DNA-dependent protein
kinase protein.
Length = 879
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 214 FSSYSSAVNIAKESSAPPSWSMRILASV----TSLIRASDLQLRKK 89
F S AV A+E + PPSWS A V +L D QLRK+
Sbjct: 133 FQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKE 178
>AB208860-1|BAD92097.1| 726|Homo sapiens protein kinase,
DNA-activated, catalytic polypeptide variant protein.
Length = 726
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 214 FSSYSSAVNIAKESSAPPSWSMRILASV----TSLIRASDLQLRKK 89
F S AV A+E + PPSWS A V +L D QLRK+
Sbjct: 11 FQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKE 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,597,881
Number of Sequences: 237096
Number of extensions: 1990041
Number of successful extensions: 3470
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3470
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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