Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2d20
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 91 9e-19
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 89 3e-18
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 31 0.75
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 2.3
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 2.3
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 2.3
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 2.3
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 2.3
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 29 2.3
U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical pr... 28 5.3
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 28 7.0
AF026214-4|AAB71315.1| 283|Caenorhabditis elegans Hypothetical ... 28 7.0
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 28 7.0
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 90.6 bits (215), Expect = 9e-19
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Frame = +3
Query: 129 VTEARILIDHDGGADDSLAIFTALLYEEKFNGPKVIGLTTTHGNVNEDQVYVNSQRILGV 308
V + +++ID DG +DD AI AL + + +++ T HG V DQ N +R +
Sbjct: 3 VDKVKLVIDSDGVSDDVRAISLALQHPKA----EILAFTAVHGCVTVDQACANIKRTIRA 58
Query: 309 ANRRDVPIYRGCSEPLIG----GSVSDFYFGNDGLGD----HENVEYQSIAAEKEHAVFR 464
+R ++P+Y+G ++ ++ +VSDF FG DG+GD VE E +HA
Sbjct: 59 NDRSNIPVYKGAAKSILSLPKDDTVSDF-FGIDGIGDKPEEFPKVERSDFEGEGKHASLA 117
Query: 465 IIELSKLYPGNLEIIAIGPLTNIAMAVKIDPFFLSRLSRLVIGAGYIYS----DDYKEPE 632
+I++ + + ++ IGPLTN+A+A+++ F + SRLVI G Y+ D E
Sbjct: 118 LIDILR-ENRDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVGNVDGGSSAE 176
Query: 633 FNVDMDVEAYHIV 671
+N D EA IV
Sbjct: 177 YNFHGDPEAASIV 189
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 89.0 bits (211), Expect = 3e-18
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 12/189 (6%)
Frame = +3
Query: 141 RILIDHDGGADDSLAIFTALLYEEKFNGPKVIGLTTTHGNVNEDQVYVNSQRILGVANRR 320
+++ID DG DD + AL + +VI +TT HG V +Q N R+L +
Sbjct: 24 KLIIDTDGVYDDIRGLTIALTNQNV----EVIAITTVHGGVTANQSAANVARLLRAIGKH 79
Query: 321 DVPIYRGCSEPLIGG---SVSDFYFGNDGLGDHENVEYQSI-----AAEKEHAVFRIIEL 476
+VP++ G + L+ V + FG+DG+G +VE +++ +A+ +AV II L
Sbjct: 80 NVPVFIGAQDSLVPKGPIQVWEELFGSDGIGGVPDVEPKTLPSDFNSAQVGNAVDAIINL 139
Query: 477 SKLYPGNLEIIAIGPLTNIAMAVKIDPFFLSRLSRLVI-GAGYI---YSDDYKEPEFNVD 644
+K ++ ++ +GPLTNIAMA++ DP R+ ++VI G Y+ + EFN
Sbjct: 140 TK-STKDIILVGLGPLTNIAMAIRKDPDISKRVKQVVIMGGNYLGVGNTQFNSTAEFNFL 198
Query: 645 MDVEAYHIV 671
MD EA HIV
Sbjct: 199 MDPEAAHIV 207
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein
ZK688.5b protein.
Length = 1595
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 232 TFGPLNFSSYSSAVNIAKESSAPPSWSMRILASVTSLIR 116
TF P F ++ N+ S+ PP W +R + S T R
Sbjct: 921 TFAPAGFPLMMASSNVPSTSAGPPGWPIRQVVSPTPTTR 959
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 232 TFGPLNFSSYSSAVNIAKESSAPPSWSMRILASVTSLIR 116
TF P F ++ N+ S+ PP W +R + S T R
Sbjct: 921 TFAPAGFPLMMASSNVPSTSAGPPGWPIRQVVSPTPTTR 959
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 143 SGFGDVINSSFRFTAEKKK*LNQIHEYSRIHFCKNK---YFCRS 21
+G+GD++N R ++ K L+ IHEY R + K + ++C+S
Sbjct: 80 NGYGDLMNVMGRRFSDFIKGLDNIHEYFRFSYPKLRAPSFYCKS 123
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 143 SGFGDVINSSFRFTAEKKK*LNQIHEYSRIHFCKNK---YFCRS 21
+G+GD++N R ++ K L+ IHEY R + K + ++C+S
Sbjct: 80 NGYGDLMNVMGRRFSDFIKGLDNIHEYFRFSYPKLRAPSFYCKS 123
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 1622 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 1663
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 2151 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 2192
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 1832 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 1873
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 1622 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 1663
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 2151 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 2192
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 1832 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 1873
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 CKSEARINDVTEARILIDHDGGADDSLAIFTALLYEEKFNGP 227
C A +DV E R+ + + GAD+ A T L K NGP
Sbjct: 1041 CIPSAMRSDVGEYRLTVKNSHGADEEKANLTVLDRPSKPNGP 1082
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 143 SGFGDVINSSFRFTAEKKK*LNQIHEYSRIHFCKNK---YFCRS 21
+G+GD++N R ++ K L+ IHEY R + K + ++C+S
Sbjct: 80 NGYGDLMNVMGRRFSDFIKGLDNIHEYFRFSYPKLRAPSFYCKS 123
>U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical
protein C18H2.4 protein.
Length = 934
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 186 IFTALLYEEKFNGPKVIGLTTTHG 257
++ ++L E+K N P ++ + TTHG
Sbjct: 828 VYASILIEDKTNYPTLVSIITTHG 851
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -1
Query: 160 SWSMRILASVTSLIRASDLQLRKKNNLTKYTNILEYI-SAKTNTS 29
+W +R+++S S+ SD+ L+ LT Y + EY+ SAK N++
Sbjct: 2757 NWLLRMVSSEYSV---SDIILQYLTTLTSYNRLAEYMFSAKKNSN 2798
>AF026214-4|AAB71315.1| 283|Caenorhabditis elegans Hypothetical
protein F52H2.5 protein.
Length = 283
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 366 SVSDFYFGNDGLGDHENVEYQSIAAEKE 449
++ F NDG +H +EY+ + A+KE
Sbjct: 44 AIEHFLEKNDGQTEHSKLEYKRVVADKE 71
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 42 FAEMYSRIFVYLVKLF-FFLSCKSEAR---INDVTEARILIDHDGGADD 176
F +++RI+ +L+ + + LS SE R + DV E LI+H+ + D
Sbjct: 210 FNSVFARIWQFLIGMIVYILSSHSEKRAETVEDVEECSKLIEHEENSRD 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,679,079
Number of Sequences: 27780
Number of extensions: 323506
Number of successful extensions: 913
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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