Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d16
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6J4T9 Cluster: Beta 1,4-N-acetylgalactosaminyltransfer...    73   5e-12
UniRef50_UPI0000DB7A1D Cluster: PREDICTED: similar to osa CG7467...    35   2.1  
UniRef50_A4QY71 Cluster: Predicted protein; n=1; Magnaporthe gri...    33   8.3  

>UniRef50_Q6J4T9 Cluster: Beta
           1,4-N-acetylgalactosaminyltransferase; n=1; Trichoplusia
           ni|Rep: Beta 1,4-N-acetylgalactosaminyltransferase -
           Trichoplusia ni (Cabbage looper)
          Length = 421

 Score = 73.3 bits (172), Expect = 5e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = +1

Query: 499 VEYLFGSILDASPLKTYLYTPTYNATQPTLRSNEKALSQKPNKSPT 636
           VEYLFGSILDASPL+TYLYTP YNATQPTLR+ E+  +  P K P+
Sbjct: 22  VEYLFGSILDASPLRTYLYTPLYNATQPTLRNVERLAANWPKKIPS 67


>UniRef50_UPI0000DB7A1D Cluster: PREDICTED: similar to osa
           CG7467-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to osa CG7467-PA, isoform A - Apis
           mellifera
          Length = 2087

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 559 PTYNATQPTLRSNEKALSQKPNKSPTAIPQP 651
           P  N T P+ +S ++ALSQ P   P+A PQP
Sbjct: 353 PPANQTNPSSQSPQRALSQSPAPPPSASPQP 383


>UniRef50_A4QY71 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 927

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 527 TPRRSKPIYTRRHTTPRNLRSEVTKRHYRRSRINHQQPSL 646
           TP  + P+  RR+ +PR +R E  +R  +  RI ++ PS+
Sbjct: 720 TPGAADPVRERRYASPRGVRWEDHERRRQNDRIGNRAPSV 759


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,002,191
Number of Sequences: 1657284
Number of extensions: 8954573
Number of successful extensions: 23183
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23153
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)