Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d16
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122233-1|AAM52745.1|  418|Drosophila melanogaster RE67845p pro...    31   1.9  
AE014134-2138|AAF53149.1|  525|Drosophila melanogaster CG6766-PA...    31   1.9  
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   4.4  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   4.4  
AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-P...    29   5.8  
AE013599-1907|AAM68555.1|  440|Drosophila melanogaster CG30076-P...    29   7.6  

>AY122233-1|AAM52745.1|  418|Drosophila melanogaster RE67845p
           protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 538 LKTYLYTPT---YNATQPTLR-SNEKALSQKPNKSPTAIPQPVFDA 663
           L+T+ YTP    Y+   PTL    E+  S KP  SP  + QP+F A
Sbjct: 54  LRTF-YTPDKEKYDCLIPTLEHQKEEEKSDKPELSPITLLQPIFSA 98


>AE014134-2138|AAF53149.1|  525|Drosophila melanogaster CG6766-PA
           protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 538 LKTYLYTPT---YNATQPTLR-SNEKALSQKPNKSPTAIPQPVFDA 663
           L+T+ YTP    Y+   PTL    E+  S KP  SP  + QP+F A
Sbjct: 54  LRTF-YTPDKEKYDCLIPTLEHQKEEEKSDKPELSPITLLQPIFSA 98


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 524  WTPRRSKPIYTRRHTTPRNLRSEVTKRHYRRSR 622
            W     KP YT R +   +  S V +RHYR  R
Sbjct: 4732 WIEELGKPQYTERASRTISFNSMVLRRHYRHLR 4764


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 524  WTPRRSKPIYTRRHTTPRNLRSEVTKRHYRRSR 622
            W     KP YT R +   +  S V +RHYR  R
Sbjct: 4732 WIEELGKPQYTERASRTISFNSMVLRRHYRHLR 4764


>AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-PA
           protein.
          Length = 1943

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 563 HTTPRNLRSEVTKRHYRRSRINHQQPSLNRCST 661
           HT   N+ + V KR  ++  + HQ P L R +T
Sbjct: 721 HTPKPNILAVVEKRKLKQEEVKHQPPELKRQAT 753


>AE013599-1907|AAM68555.1|  440|Drosophila melanogaster CG30076-PA
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 418 PSTHAMTKLFRPLKRRLQTRCPVKLSHYLHRKFRL*TLE 302
           PS   + KL RP+ +   T   V +SH +H+  R+  LE
Sbjct: 74  PSPKKVIKLRRPIPKPTITESSVMISHGIHKDHRMRQLE 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,052,396
Number of Sequences: 53049
Number of extensions: 426350
Number of successful extensions: 1486
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)