Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d13
         (274 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1D741 Cluster: Putative uncharacterized protein; n=2; ...    32   2.9  
UniRef50_UPI0000D9AB0C Cluster: PREDICTED: hypothetical protein;...    31   6.6  
UniRef50_O28927 Cluster: Putative thymidine phosphorylase 2; n=2...    31   6.6  
UniRef50_UPI0000EBE43D Cluster: PREDICTED: hypothetical protein;...    30   8.7  
UniRef50_Q4QEY4 Cluster: Putative uncharacterized protein; n=3; ...    30   8.7  

>UniRef50_A1D741 Cluster: Putative uncharacterized protein; n=2;
           Eurotiomycetidae|Rep: Putative uncharacterized protein -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 216

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 127 PAVGEAGTMAXSTLGYLHGSHPLPGTRSGLLAXPS 231
           P +G+A       LG   GS P+PG +SG L  PS
Sbjct: 19  PPLGDANRFKSPILGSPRGSPPIPGAQSGGLPSPS 53


>UniRef50_UPI0000D9AB0C Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 520

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +2

Query: 68  CFMHXASSSFGCPSTCHRWCRRLGRLEQWRXQPLDTSMDR 187
           CF+  +  S GCP+ C    R LGRL   R    D    R
Sbjct: 116 CFLSSSDFSEGCPAVCPAASRALGRLRHDRNAREDAGWGR 155


>UniRef50_O28927 Cluster: Putative thymidine phosphorylase 2; n=2;
           Archaeoglobus fulgidus|Rep: Putative thymidine
           phosphorylase 2 - Archaeoglobus fulgidus
          Length = 505

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 133 VGEAGTMAXSTLGYLHGSHPLPGTRSGLLAXPSVVXAXIALP 258
           VGE       T+  +H    LPG R  L+A P+V  A + +P
Sbjct: 150 VGERVVFERGTVVDMHSIGGLPGNRFSLIAVPTVAAAGLLIP 191


>UniRef50_UPI0000EBE43D Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 274

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -3

Query: 227 GXARSPLRV-PGSGCDPWRYPRVXCAIVPASPTA 129
           G +R PL   P   C PW  P   C ++  SPTA
Sbjct: 150 GPSRLPLTAGPADPCPPWSPPLQPCFVLGPSPTA 183


>UniRef50_Q4QEY4 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 688

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 32  HFINKNGLESDYCFMHXASSSFGCPSTCHRWCRRLGRLEQ-WRXQPLDTSMDRIRSLVPA 208
           H ++ + L S+ C    ++++    +T     R  G  E+ W+ +PL +++   RS VP+
Sbjct: 160 HHMDYHRLASEACTADASATATATTTTAA--AREEGHKERVWKPRPLTSTLYAFRSGVPS 217

Query: 209 VGSLH 223
            G LH
Sbjct: 218 TGLLH 222


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,250,671
Number of Sequences: 1657284
Number of extensions: 3727864
Number of successful extensions: 10804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10801
length of database: 575,637,011
effective HSP length: 68
effective length of database: 462,941,699
effective search space used: 10184717378
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)