Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d11
         (756 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NG44 Cluster: ENSANGP00000030660; n=3; Culicidae|Rep:...   182   6e-45
UniRef50_UPI0000F1DA66 Cluster: PREDICTED: hypothetical protein;...    39   0.15 
UniRef50_Q4TFL0 Cluster: Chromosome undetermined SCAF4399, whole...    38   0.20 
UniRef50_A0LTZ5 Cluster: Cytochrome oxidase assembly; n=1; Acido...    34   3.3  
UniRef50_Q389L7 Cluster: Procyclic form surface glycoprotein; n=...    34   3.3  
UniRef50_A7TRC5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_A5K0H2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q5QML3 Cluster: Putative uncharacterized protein P0454H...    33   7.6  

>UniRef50_A0NG44 Cluster: ENSANGP00000030660; n=3; Culicidae|Rep:
           ENSANGP00000030660 - Anopheles gambiae str. PEST
          Length = 213

 Score =  182 bits (444), Expect = 6e-45
 Identities = 84/125 (67%), Positives = 101/125 (80%)
 Frame = +2

Query: 374 MSLDEGRQSQRPYRYGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVAGALLICAAMCC 553
           MSL+E R++QRPYRYGM+LLC GAL+NWLGLAE+Y+EPVRY GVACI+AGA LIC AMCC
Sbjct: 8   MSLEETRRTQRPYRYGMMLLCVGALVNWLGLAENYSEPVRYAGVACILAGACLICTAMCC 67

Query: 554 WLQSPARQPQNERASTDTHQIDDPIHVISMPDEETMQQKPPDYDTVAGAPPTYDDAIKLN 733
           WL +P       R+ T+  + DDP+HVIS  DE   ++KPPDYDTVA APP+YDDAIKL+
Sbjct: 68  WLHTPG------RSGTNGDEGDDPVHVISANDER-RREKPPDYDTVAAAPPSYDDAIKLD 120

Query: 734 PARLL 748
           PA LL
Sbjct: 121 PAALL 125


>UniRef50_UPI0000F1DA66 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 115

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +2

Query: 521 GALLICAAMCCWLQSPARQPQNERASTDTHQIDDP-IHVISMPDEETMQQKPPDYDTV-- 691
           G L IC A  C +    R+ + ER       +D P ++VI +   E    +PP Y TV  
Sbjct: 20  GMLSICCAGFCKMFQRFRKERIERLQAQARHMDRPSVYVIPITLSEDDLHRPPRYSTVQF 79

Query: 692 AGAPPTYDDAIKLNP 736
             APP+Y++ + L P
Sbjct: 80  CEAPPSYNE-LNLKP 93


>UniRef50_Q4TFL0 Cluster: Chromosome undetermined SCAF4399, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF4399,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 118

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +2

Query: 416 YGMVLLCAGALINWLGLA-EDYAEPVRYVGVACIVAGALLICAAMCCWLQSPARQPQNER 592
           +G+V+L AG ++  +      +   + Y+G+  + AG LL+ +++ CW     R+ +  R
Sbjct: 44  FGVVVLIAGIVVTAVAYTFNSHGSTISYLGLVLLAAGLLLLASSLLCWKSRLDRKKERRR 103

Query: 593 AS 598
            S
Sbjct: 104 ES 105


>UniRef50_A0LTZ5 Cluster: Cytochrome oxidase assembly; n=1;
           Acidothermus cellulolyticus 11B|Rep: Cytochrome oxidase
           assembly - Acidothermus cellulolyticus (strain ATCC
           43068 / 11B)
          Length = 370

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +2

Query: 380 LDEGRQSQRPYRYGMVLLCAGALINW----LGLAEDYAEPVRYVGVACIVAGALLICAAM 547
           +D GR++ R  R+ +VLL   A+I W    LGL     E +  +G A +V GA  + A++
Sbjct: 238 MDVGRRTIRATRWMVVLLAVQAVIGWTQYFLGLPAGLVE-IHMLGAASLVVGATCVSASL 296


>UniRef50_Q389L7 Cluster: Procyclic form surface glycoprotein; n=2;
           Trypanosoma brucei|Rep: Procyclic form surface
           glycoprotein - Trypanosoma brucei
          Length = 425

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +2

Query: 473 DYAEPVRYVGVACIVAGALL------ICAAMCCWLQSPARQPQNERASTDTHQID 619
           ++  P R +G+ACIVAG+LL      +C  + C+         N+ +  DT Q D
Sbjct: 255 EFGVPNRTMGIACIVAGSLLLLLEIAVCVCVVCFCLKRKGSSSNDTSDPDTPQGD 309


>UniRef50_A7TRC5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 316

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 599 TDTHQIDDPIHVISMPDEETMQQKPPDYDTVAGAPPTYDDAIK 727
           T T  IDD I ++S  +EE+ +Q P D D  A    +Y + IK
Sbjct: 147 TSTDPIDDQISLMSSSNEESSKQSPDDEDQDASIRNSYGEIIK 189


>UniRef50_A5K0H2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1425

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 436 CGSANQLAGSG*RLRGTGAICGRGVHRRRSTTHLRGDVLLAAI 564
           C +       G   RGTG+  GRG H RR + H R D+LL  I
Sbjct: 88  CATEKNNPNDGEDKRGTGSSTGRGTHHRRGSHHKR-DLLLINI 129


>UniRef50_Q5QML3 Cluster: Putative uncharacterized protein
           P0454H12.9; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0454H12.9 - Oryza sativa subsp. japonica (Rice)
          Length = 135

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 534 MSSAPATMHATPTYRTGSA*SSARP-SQLISAPAHNNTMP 418
           +   PA  H TP  R GSA +SAR  +Q  SAPA  ++ P
Sbjct: 6   VGQVPAISHPTPVRRLGSAPASARAGAQRTSAPASESSSP 45


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,024,793
Number of Sequences: 1657284
Number of extensions: 15314461
Number of successful extensions: 45496
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45440
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)