Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d11
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060992-1|AAL28540.1|  250|Drosophila melanogaster HL01138p pro...    31   2.2  
AE014296-706|AAF47802.1|  250|Drosophila melanogaster CG1079-PA ...    31   2.2  
AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-P...    30   3.9  
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    30   3.9  
X54648-2|CAA38461.1|  415|Drosophila melanogaster frizzled (clon...    29   5.2  
X54648-1|CAA38460.1|  581|Drosophila melanogaster frizzled (clon...    29   5.2  
X54647-1|CAA38459.1|  415|Drosophila melanogaster frizzled protein.    29   5.2  
X54646-1|CAA38458.1|  581|Drosophila melanogaster frizzled protein.    29   5.2  
AY051808-1|AAK93232.1|  581|Drosophila melanogaster LD32066p pro...    29   5.2  
AE014296-2378|AAN11810.1|  415|Drosophila melanogaster CG17697-P...    29   5.2  
AE014296-2377|AAF49746.3|  581|Drosophila melanogaster CG17697-P...    29   5.2  
AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p pro...    29   9.1  
AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB...    29   9.1  
AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA...    29   9.1  

>AY060992-1|AAL28540.1|  250|Drosophila melanogaster HL01138p
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114 TRAVNFIDGSIFYIFILCNFLVIVDFCFYYII 209
           T+ V  + G + Y FI+C  L+ +D+C +Y++
Sbjct: 163 TKIVQLLGGQVPY-FIICYILICMDYCKWYVM 193


>AE014296-706|AAF47802.1|  250|Drosophila melanogaster CG1079-PA
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114 TRAVNFIDGSIFYIFILCNFLVIVDFCFYYII 209
           T+ V  + G + Y FI+C  L+ +D+C +Y++
Sbjct: 163 TKIVQLLGGQVPY-FIICYILICMDYCKWYVM 193


>AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-PA
           protein.
          Length = 1240

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 578 PQNERASTDTHQIDDPIHVISMPDEETMQQKPPDYDTVAGAPPTYDDAIKL 730
           P+  + STD+  +D+  + +  PDEE  +QK    + ++ +     D  KL
Sbjct: 836 PRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKL 886


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
            protein.
          Length = 950

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 34/94 (36%), Positives = 45/94 (47%)
 Frame = -1

Query: 720  ASSYVGGAPATVS*SGGFCCIVSSSGIDIT*MGSSI*CVSVEARSFCGCLAGDCSQQHIA 541
            +SSY  GAPA+   S  F    SS G   T  GSS    S  + SF G  +        +
Sbjct: 821  SSSY--GAPASGP-SPSFSAPSSSYGAPSTGSGSS--SFSSSSSSFSGASSSS------S 869

Query: 540  AQMSSAPATMHATPTYRTGSA*SSARPSQLISAP 439
            A   SAP++ +  P+  +G + SSA PS   SAP
Sbjct: 870  AGYPSAPSSSYGAPSTGSGHSFSSA-PSSSYSAP 902


>X54648-2|CAA38461.1|  415|Drosophila melanogaster frizzled (clone
           BE2) protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>X54648-1|CAA38460.1|  581|Drosophila melanogaster frizzled (clone
           AC2) protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>X54647-1|CAA38459.1|  415|Drosophila melanogaster frizzled protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>X54646-1|CAA38458.1|  581|Drosophila melanogaster frizzled protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>AY051808-1|AAK93232.1|  581|Drosophila melanogaster LD32066p
           protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>AE014296-2378|AAN11810.1|  415|Drosophila melanogaster CG17697-PB,
           isoform B protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>AE014296-2377|AAF49746.3|  581|Drosophila melanogaster CG17697-PA,
           isoform A protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 513 MHATPTYRTGSA*SSARPSQLISAPAHNNTMPYLYGLCDCLP 388
           + A+P YR+G    ++  ++L   P HN   P    +C  +P
Sbjct: 24  LDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICKNIP 65


>AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 437 HITTPCHTCMAFVIVCLRLMTC 372
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB,
           isoform B protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 437 HITTPCHTCMAFVIVCLRLMTC 372
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA,
           isoform A protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 437 HITTPCHTCMAFVIVCLRLMTC 372
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,849,149
Number of Sequences: 53049
Number of extensions: 740458
Number of successful extensions: 2240
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2238
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)