Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d07
         (392 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   1.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   2.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   4.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   7.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   7.6  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +1

Query: 100 DKPTTKPICEQAFGNSGPCFAYIKLYSYNQKTKKC 204
           +KP   P+C++ F  S     +++ +S  ++  +C
Sbjct: 47  EKPFRCPVCDRRFSQSSSVTTHMRTHS-GERPYRC 80


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +1

Query: 100 DKPTTKPICEQAFGNSGPCFAYIKLYSYNQKTKKC 204
           +KP   P+C++ F  S     +++ +S  ++  +C
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTHS-GERPYRC 336


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 128 SRLLAIRALVSPTLSYTR-TIRRRRSVKNSFT-EAARGT 238
           +RLL +    SP+  +TR  I+RR   +++ T    RGT
Sbjct: 254 NRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGT 292


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -3

Query: 129 LAYRL-RCWLIT 97
           L YRL RCWLI+
Sbjct: 217 LLYRLLRCWLIS 228


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 391 FFFIPIYIFNSFYTKLHR 338
           F+FI   +F SFY  LH+
Sbjct: 297 FYFIIFQVFESFY--LHK 312


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -3

Query: 129 LAYRL-RCWLIT 97
           L YRL RCWLI+
Sbjct: 217 LLYRLLRCWLIS 228


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 55  TTGFLFAACLTSVMSDKPTTKP 120
           TT       LT+  + KP+TKP
Sbjct: 164 TTSTTTRTTLTTKFTTKPSTKP 185


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 261 RMRTEMHKVTDTFELTH 311
           + RTE+  +T TF+ T+
Sbjct: 461 KRRTELEDLTPTFDFTN 477


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 286 TLCISVRIRPMCRNDCRSP 230
           T C  V +  +C  DC +P
Sbjct: 532 TRCWEVFMDGICNEDCNNP 550


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 100 DKPTTKPICEQAFG 141
           D+P T  +C ++FG
Sbjct: 132 DRPFTCEVCNRSFG 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,017
Number of Sequences: 336
Number of extensions: 1671
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)