Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2d07
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   1.7  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   2.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   2.3  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   3.0  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    23   5.3  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    23   5.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   7.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   9.2  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 134 LLAIRALVSPTLSYTRTIRRR 196
           L A+R  V P L+Y+  +RRR
Sbjct: 249 LTAVRGDVVPELTYSEVVRRR 269


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 181 YNQKTKKCEEFIYGGCKGNDNRFDT 255
           ++Q   KC  + Y  CK + N +D+
Sbjct: 425 FDQTVLKCNWWFYVDCKSSKNLYDS 449


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 181 YNQKTKKCEEFIYGGCKGNDNRFDT 255
           ++Q   KC  + Y  CK + N +D+
Sbjct: 433 FDQTVLKCNWWFYVDCKSSKNLYDS 457


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 251 SKRLSFPLQPP*MNSSHFFVF*LYEY 174
           S R S P  P   + +H FVF +Y+Y
Sbjct: 407 SFRSSRPADPAMFHCNHPFVFLIYDY 432


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 376 IYIFNSFYTKLHRFIHQLEKRA 311
           +YI N  +T+LH+ +  + +R+
Sbjct: 56  VYISNQIFTELHQELSSVNERS 77


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 376 IYIFNSFYTKLHRFIHQLEKRA 311
           +YI N  +T+LH+ +  + +R+
Sbjct: 56  VYISNQIFTELHQELSSVNERS 77


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 59  VVRKSTDRNMTSLIQYCMS 3
           V +KST  N+   + YC S
Sbjct: 654 VPKKSTTTNLVEFVTYCTS 672


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 349 KLHRFIHQLEKRACVNSKVSVTLC 278
           K H+ IHQ+  +     K+  T C
Sbjct: 284 KAHKMIHQVGNKPVFQCKLCPTTC 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,719
Number of Sequences: 2352
Number of extensions: 7212
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)