Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2c24
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       27   0.17 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   1.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +3

Query: 126 CRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTPIRSRCFSPRGTC 263
           CR   SC DR  D   N  N  K  TC L+      + C    GTC
Sbjct: 115 CRNNGSCVDRIADFECNCKNGWKGKTCSLKDSHCDHTTC-KNGGTC 159


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +2

Query: 125 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSIT 220
           +PP  + P  +  P Y     M  V   P++T
Sbjct: 42  LPPITYPPSDWNCPQYNAPPYMSSVLQLPTVT 73


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +2

Query: 125 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSIT 220
           +PP  + P  +  P Y     M  V   P++T
Sbjct: 33  LPPITYPPSDWNCPQYNAPPYMSSVLQLPTVT 64


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 336  WPTETVTIPP 307
            WPT+  TIPP
Sbjct: 1079 WPTQGTTIPP 1088



 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +1

Query: 280  RRQEIPGSVRWNRHRLRGPLSSKSKCSPQRSTR--CTVAYDQPVQTS 414
            R+Q   G + WN+ R        +KC  ++      T ++ +P + S
Sbjct: 1127 RKQYCAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPS 1173


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 774 VDILSVLMHSPVHEQDPGACEIESLQPPKAPL-KGSG 667
           V +LS  MH    E+ PG   + + Q P++ L  G G
Sbjct: 282 VMLLSDWMHEDATERFPGRLAVNTGQDPESLLINGKG 318


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 774 VDILSVLMHSPVHEQDPGACEIESLQPPKAPL-KGSG 667
           V +LS  MH    E+ PG   + + Q P++ L  G G
Sbjct: 282 VMLLSDWMHEDATERFPGRLAVNTGQDPESLLINGKG 318


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = +2

Query: 122 KMPPTDFVPRPYTGPSYQ-QVEQMKGVYMPPSITNA--YKKPVLLTQGHMQW 268
           K+ P D  P PY G  ++  +  +   Y+ P+   A  ++  +    G M W
Sbjct: 390 KVEPRDKAPSPYGGQMFEAPIPNVSPHYVTPTPPEAPLFQNVLPPIGGMMNW 441


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -1

Query: 624 LYDWVAVRPMRLLV*PW*LVCSDMMSRFPVYAFASKVASSL 502
           LY W +   + +L   W     D+M  F ++ F   +  S+
Sbjct: 548 LYCWSSFLKISVLQSLWASPTCDLMYEFQIFTFLMSLLQSI 588


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,955
Number of Sequences: 336
Number of extensions: 4793
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)