Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2c23
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    28   0.27 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   0.48 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.9  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +1

Query: 478 YKHKHPSKRFAAIDLD--PYGCPSI 546
           Y   HP  +FA +DLD  PYG P++
Sbjct: 233 YLGLHPVAKFATLDLDYPPYGLPTV 257


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +1

Query: 223 KKQKKLETVQDEESGGNPEPKITILEA-LSATGLRSIRYAKEIPYATNIIANDLSEQAVE 399
           KK+KKLE + +   GGNP+  +  +E   +A  L S+    E  + T  I  D  ++  E
Sbjct: 409 KKRKKLEEILN---GGNPKGTLVFVETKRNADYLASL--MSETQFPTTSIHGDRLQRERE 463

Query: 400 TIKHNIEHNQVSRIIETS 453
              ++ +  ++  +I TS
Sbjct: 464 MALYDFKSGRMDVLIATS 481


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 184 IEDYKAEKLARFEKKQKKLET-VQDEESGGNPEPKITI 294
           +E  +AE  + F +K+KK E    DE+    P+P  T+
Sbjct: 41  LERKRAEGESDFGRKKKKKEIRYDDEDEDEGPQPDPTL 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,826
Number of Sequences: 2352
Number of extensions: 13171
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)