Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2c18
(719 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 369 e-101
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 317 2e-85
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 274 1e-72
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 200 3e-50
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 197 2e-49
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 188 2e-46
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 187 2e-46
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 182 6e-45
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 162 7e-39
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 159 5e-38
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 157 3e-37
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 152 7e-36
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 149 7e-35
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 129 8e-29
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 1e-17
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 59 9e-08
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 57 5e-07
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 55 2e-06
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 55 2e-06
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 53 6e-06
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 53 8e-06
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 51 3e-05
UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n... 51 3e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 1e-04
UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89; Bacteri... 49 1e-04
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 47 5e-04
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 45 0.002
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 44 0.004
UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n... 44 0.005
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.007
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 43 0.009
UniRef50_A6YGB1 Cluster: 30S ribosomal protein S7; n=1; Leptosir... 41 0.027
UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial... 41 0.035
UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1; ... 40 0.047
UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1; Methano... 39 0.11
UniRef50_Q9AIG8 Cluster: 30S ribosomal protein S7; n=2; Candidat... 39 0.11
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.76
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 1.0
UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome sh... 36 1.3
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.8
UniRef50_P46745 Cluster: Mitochondrial ribosomal protein S7; n=1... 34 4.1
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 5.4
UniRef50_Q4E4M2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_O96282 Cluster: Putative uncharacterized protein PFB095... 33 7.1
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A6EW85 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 369 bits (908), Expect = e-101
Identities = 176/193 (91%), Positives = 185/193 (95%)
Frame = +2
Query: 140 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 319
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 320 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 499
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 500 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 679
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Query: 680 AIKKKDELERVAK 718
AIKKKDELERVAK
Sbjct: 189 AIKKKDELERVAK 201
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 317 bits (779), Expect = 2e-85
Identities = 152/187 (81%), Positives = 171/187 (91%), Gaps = 1/187 (0%)
Frame = +2
Query: 161 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 337
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 338 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 517
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 518 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKD 697
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187
Query: 698 ELERVAK 718
E+ERVAK
Sbjct: 188 EIERVAK 194
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 274 bits (672), Expect = 1e-72
Identities = 140/204 (68%), Positives = 167/204 (81%)
Frame = +2
Query: 107 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 286
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 287 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 466
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 467 NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 646
GPREDSTRIG AGTVRRQAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEI 176
Query: 647 INAAKGSSNSYAIKKKDELERVAK 718
INAAKGSSNSYAIKKKDELERVAK
Sbjct: 177 INAAKGSSNSYAIKKKDELERVAK 200
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 200 bits (488), Expect = 3e-50
Identities = 89/185 (48%), Positives = 134/185 (72%)
Frame = +2
Query: 161 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 340
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 341 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 520
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 521 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDE 700
R+AVDVSP R+++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ SYAIKKK +
Sbjct: 139 REAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKKKLD 198
Query: 701 LERVA 715
LE+ A
Sbjct: 199 LEKNA 203
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 197 bits (481), Expect = 2e-49
Identities = 96/104 (92%), Positives = 100/104 (96%)
Frame = +2
Query: 407 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 586
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 587 AREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAK 718
AREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAK
Sbjct: 234 AREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAK 277
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 188 bits (457), Expect = 2e-46
Identities = 93/186 (50%), Positives = 132/186 (70%)
Frame = +2
Query: 161 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 340
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 341 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 520
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 521 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDE 700
+AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I AA+ + ++I++K+E
Sbjct: 129 HEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEE 188
Query: 701 LERVAK 718
+ER+A+
Sbjct: 189 IERIAE 194
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 187 bits (456), Expect = 2e-46
Identities = 96/186 (51%), Positives = 133/186 (71%)
Frame = +2
Query: 161 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 340
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 341 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 520
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 521 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDE 700
R +VDVSPL+R++ AI L G R A+FRN T+AE +A+ELI A+ S NSYA+ KK E
Sbjct: 140 RTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKE 199
Query: 701 LERVAK 718
+ER+A+
Sbjct: 200 IERIAQ 205
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 182 bits (444), Expect = 6e-45
Identities = 95/184 (51%), Positives = 122/184 (66%)
Frame = +2
Query: 164 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 343
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 344 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 523
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 524 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDEL 703
+VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA SYA++K++EL
Sbjct: 156 VSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREEL 215
Query: 704 ERVA 715
ER+A
Sbjct: 216 ERIA 219
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 162 bits (394), Expect = 7e-39
Identities = 79/184 (42%), Positives = 123/184 (66%)
Frame = +2
Query: 167 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 346
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 347 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 526
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 527 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELE 706
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA + S++I +KD E
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKE 182
Query: 707 RVAK 718
RVAK
Sbjct: 183 RVAK 186
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 159 bits (387), Expect = 5e-38
Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 1/187 (0%)
Frame = +2
Query: 161 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 340
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 341 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 520
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 521 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGS-SNSYAIKKKD 697
Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+ A+K S+A+KKK+
Sbjct: 125 LQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKE 184
Query: 698 ELERVAK 718
E ERVA+
Sbjct: 185 EKERVAQ 191
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 157 bits (380), Expect = 3e-37
Identities = 87/213 (40%), Positives = 128/213 (60%)
Frame = +2
Query: 77 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 256
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 257 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 436
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 437 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 616
P+QVLV+A+ N+ PRE++ R+ G QAVD +P RRV+QA+ L GA A+F+
Sbjct: 114 PIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPT 173
Query: 617 TIAECVADELINAAKGSSNSYAIKKKDELERVA 715
AE +A++L AA + +YAI +K E ERVA
Sbjct: 174 DAAEALANQLAGAADYNVQTYAIGQKKEKERVA 206
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 152 bits (369), Expect = 7e-36
Identities = 80/200 (40%), Positives = 125/200 (62%), Gaps = 2/200 (1%)
Frame = +2
Query: 125 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 298
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 299 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 478
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 479 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 658
RE++ R+ G ++VD +PLRRV+ AI + +++ ++ K + +ADELI A+
Sbjct: 122 REETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAAS 181
Query: 659 KGSSNSYAIKKKDELERVAK 718
KG + Y++ KK+E ER+AK
Sbjct: 182 KGDAKCYSVGKKEEKERIAK 201
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 149 bits (361), Expect = 7e-35
Identities = 88/202 (43%), Positives = 120/202 (59%), Gaps = 16/202 (7%)
Frame = +2
Query: 161 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 340
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 341 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 472
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 473 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELIN 652
PRED+T + G AVD+SPLRR++ A+ + GA +R + AE +A+E+I
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIIL 193
Query: 653 AAKGSSNSYAIKKKDELERVAK 718
AA SYA KK E+ER+A+
Sbjct: 194 AANKDPKSYAYSKKLEIERIAE 215
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 129 bits (311), Expect = 8e-29
Identities = 69/174 (39%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Frame = +2
Query: 197 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 373
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 374 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 553
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRR 124
Query: 554 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 715
+++A+ + GA +A+F++ I +C+A+E++ AA+ +NS+AI KK+E+ERVA
Sbjct: 125 LDEALRNIARGATKASFKHKIHIQDCLANEILLAARNDANSFAISKKEEIERVA 178
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 305 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 460
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 59.3 bits (137), Expect = 9e-08
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +2
Query: 290 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 469
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 470 SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 643
+ P + RIG G+ + V+VS R N ++ + +R+ R T++ +A+E
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFRATNLSLRWIIQYSRQRVGR---TMSIKLANE 123
Query: 644 LINAAKGSSNSYAIKKKDELERV 712
+I+ A N+ IKKK+E ++
Sbjct: 124 IIDTANDIGNT--IKKKEETHKM 144
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 56.8 bits (131), Expect = 5e-07
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Frame = +2
Query: 326 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 499
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 500 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 679
G G+ + ++V R N A+ + ARE A K+++ +A+E+++AA + +S
Sbjct: 81 G--GSTYQVPMEVRAFRGTNLALRWITKYARERAG---KSMSMKLANEIMDAANETGSS- 134
Query: 680 AIKKKDELERVAK 718
I+K++E+ R+A+
Sbjct: 135 -IRKREEIHRMAE 146
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 55.2 bits (127), Expect = 2e-06
Identities = 40/146 (27%), Positives = 72/146 (49%)
Frame = +2
Query: 278 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 457
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 458 AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVA 637
+ GP +T+ G +++ V + PL + + + + R + +A
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI-PLNEKQRNRFAIKWILEASNSRKSNDFSVRLA 218
Query: 638 DELINAAKGSSNSYAIKKKDELERVA 715
+E+INA +G S+ Y KK ++ + A
Sbjct: 219 EEIINAYQGKSSGY--DKKAQMHKQA 242
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 54.8 bits (126), Expect = 2e-06
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Frame = +2
Query: 284 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 463
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 464 INSGPRED-STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 640
P TR + G+ R+ +++ + AI L +++ RN +A ++
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRN---MAFKLSS 123
Query: 641 ELINAAKGSSNSYAIKKKDELERVAK 718
EL++AAKGS AI+KK+ R+A+
Sbjct: 124 ELVDAAKGSGG--AIRKKEATHRMAE 147
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 53.2 bits (122), Expect = 6e-06
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = +2
Query: 326 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRI 499
RL N L+ +GKK +A +I+ A + I T NPL VL AI P + R+
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 500 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 679
G G+ + +++ + AI L +R+ RN +A ++ EL++AAKGS +
Sbjct: 81 G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 133
Query: 680 AIKKKDELERVAK 718
AI+KK+E R+A+
Sbjct: 134 AIRKKEETHRMAE 146
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 52.8 bits (121), Expect = 8e-06
Identities = 46/145 (31%), Positives = 72/145 (49%)
Frame = +2
Query: 284 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 463
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 464 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 643
P+ +AG R+ +++ P + AI L +R+ +N +A ++ E
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQPRQAKVLAIRWLLEASRKRPGQN---MAIKLSAE 122
Query: 644 LINAAKGSSNSYAIKKKDELERVAK 718
L++AAKG AI+KK+E R+A+
Sbjct: 123 LVDAAKGKGG--AIRKKEETRRMAE 145
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 71 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 235
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 662 GSSNSYAIKKKDELERVAK 718
GSSNSYAIKKKDELERVAK
Sbjct: 56 GSSNSYAIKKKDELERVAK 74
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 50.8 bits (116), Expect = 3e-05
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 317 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 496
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 497 IGRAGTVRRQA-VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 673
R G Q V V P RR + L T AR R T+ + +A E+++AA ++
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTTLGLRWLVTIAR---LRGEHTMQDRLAKEILDAA--NNT 131
Query: 674 SYAIKKKDELERVAK 718
A+KK+++ R+A+
Sbjct: 132 GAAVKKREDTHRMAE 146
>UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Bigelowiella natans|Rep: Chloroplast 30S ribosomal
protein S7 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 159
Score = 50.8 bits (116), Expect = 3e-05
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Frame = +2
Query: 365 GKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRIGRAGTVRRQAVDV 538
G K +A +I+ + + I L+T ++P++++ A+ N P + S R+G G+ + V +
Sbjct: 34 GNKALARKIIYRSLKDIELVTKQDPIKIVEQAVSNVTPFVEIRSRRLG--GSTTQIPVFI 91
Query: 539 SPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 715
+ R V AI WL +A N +I + ++ E++NA+ G AIKK+DE+ R+A
Sbjct: 92 NNERGVTLAIRWLFQASKNKAG--NKYSIIKRLSSEIVNASNGMGE--AIKKRDEMHRMA 147
Query: 716 K 718
+
Sbjct: 148 E 148
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 411 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 247
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89;
Bacteria|Rep: 30S ribosomal protein S7 - Pseudomonas
aeruginosa
Length = 156
Score = 48.8 bits (111), Expect = 1e-04
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Frame = +2
Query: 278 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 457
R A KR A ++ M H +GKK +A RIV A + + +PL+
Sbjct: 5 RVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVYGALDKVKERGKADPLETFEK 64
Query: 458 AIINSGPRED--STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC 631
A+ P + S R+G G + V+V P RR A+ L AR+ R K++A
Sbjct: 65 ALDAIAPLVEVKSRRVG--GATYQVPVEVRPSRRNALAMRWLVDFARK---RGEKSMALR 119
Query: 632 VADELINAAKGSSNSYAIKKKDELERVAK 718
+A EL++AA+G A+KK++++ R+A+
Sbjct: 120 LAGELLDAAEG--KGAAVKKREDVHRMAE 146
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/133 (24%), Positives = 67/133 (50%)
Frame = +2
Query: 281 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 460
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 461 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 640
+ P +T++ + G + + V PL++ + + + A+ + + +++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKKRQRNRYPITWILEGASKKKSPDYSVRLSE 231
Query: 641 ELINAAKGSSNSY 679
E+I+A +G S+ Y
Sbjct: 232 EIISAYEGKSSGY 244
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 44.8 bits (101), Expect = 0.002
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Frame = +2
Query: 314 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 490
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 491 TRIGRAGTVRRQAVDVSPLRRVNQAI---WLLCTGAREAAFRNIKTIAECVADELINAAK 661
RAG++ +Q V P +AI W++ ++A K + + E+ A+
Sbjct: 76 KPRRRAGSI-QQVPRVMPSAERARAIAIRWIVSACQKKAG----KDMISKLFSEISEAS- 129
Query: 662 GSSNSYAIKKKDELERVA 715
+ N A +KK+EL ++A
Sbjct: 130 -NKNGAAFRKKEELHKMA 146
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 44.0 bits (99), Expect = 0.004
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +2
Query: 320 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 499
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISPLMKLVSA 181
Query: 500 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 676
R + + +R A+ W+L E + K +++ + E+I +SN
Sbjct: 182 KRFNKSVEFPMPLKERQRRRIALQWIL----GECKSSSPKRLSDRIVKEIIAIRSKTSNC 237
Query: 677 YAIKKKDELERV 712
+ KKKD L R+
Sbjct: 238 F--KKKDHLHRM 247
>UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 30S ribosomal
protein S7 - Cyanidioschyzon merolae (Red alga)
Length = 148
Score = 43.6 bits (98), Expect = 0.005
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +2
Query: 326 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR--EDSTRI 499
RL L++H GKK +A RIV A + I ++ + +L A+ P + R+
Sbjct: 14 RLVELLIVHVLRKGKKSLARRIVYEALKRIEERNQQSGVLMLEQAVSQVMPLVCVKARRV 73
Query: 500 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 676
G G + +V P +N A+ W++ + A R+ K++A +A E+ +AA G+
Sbjct: 74 G--GATYQVPQEVKPYTGINNALRWIV----KYAKDRSGKSMAIKLAAEIWDAAHGTGG- 126
Query: 677 YAIKKKDELERVAK 718
AI+KK+E R+A+
Sbjct: 127 -AIRKKEETHRMAE 139
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 43.2 bits (97), Expect = 0.007
Identities = 35/134 (26%), Positives = 63/134 (47%)
Frame = +2
Query: 314 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 493
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAPLVKVQ 219
Query: 494 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 673
+ G + V ++ + +A+ + +++ R ++ +A E + +G+S+
Sbjct: 220 SKKQGGKSLQVPVALTQRQSTRKALTWIIEASKKRPDRELE---RRLAAEFLAVVEGTSS 276
Query: 674 SYAIKKKDELERVA 715
AI KK+E ++A
Sbjct: 277 --AIVKKEEQHKIA 288
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 42.7 bits (96), Expect = 0.009
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Frame = +2
Query: 314 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 493
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAPLM-MV 193
Query: 494 RIGRAGTVRRQAVDVSPL--RRVNQAIW-LLCTGAREAAFRNIKTIAECVADELINAAKG 664
+ G + + V PL R+ N+ W + GA + R A + +EL+ +G
Sbjct: 194 KTFNTGVAKAAVIPV-PLSQRQRNRIAWKWIVEGANK---RVSNDFAVRLGEELVAVYEG 249
Query: 665 SSNSYAIKKKDELERVA 715
S+ + +K+D++ + A
Sbjct: 250 KSSGF--EKRDQMHKTA 264
>UniRef50_A6YGB1 Cluster: 30S ribosomal protein S7; n=1; Leptosira
terrestris|Rep: 30S ribosomal protein S7 - Leptosira
terrestris (Pleurastrum terrestre)
Length = 154
Score = 41.1 bits (92), Expect = 0.027
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +2
Query: 329 LTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 508
L ++++ H GKK +A + I T ++PL+V+ A+ N P +
Sbjct: 22 LVHTIVNHLMKKGKKSLAYMMFYETLSEIKQKTEQDPLEVIQKAVNNVRPLVIVKSRRVS 81
Query: 509 GTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAI 685
G+ R+ + V V AI W+L + K++ + +E ++A+K N AI
Sbjct: 82 GSTRQVPLSVDYEIGVALAIRWILAACRKRVG----KSMISKMTNEFLDASKNIGN--AI 135
Query: 686 KKKDELERVAK 718
+KKDE+ ++A+
Sbjct: 136 RKKDEIAKMAQ 146
>UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 37S ribosomal
protein S7, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 247
Score = 40.7 bits (91), Expect = 0.035
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Frame = +2
Query: 320 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 499
++ +TN +M HG KK A I+ A +++ T ++P+Q L ++ P T+
Sbjct: 114 LDHITNMIMRHG----KKEKAQTILSRALYLVYCQTRQDPIQALEKSLDELAPLM-MTKT 168
Query: 500 GRAGTVRRQAVDVSPL--RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 673
G + + V PL R+ N+ W + A R A + +EL AKG+S+
Sbjct: 169 FNTGVAKASVIPV-PLNKRQRNRIAWNWI--VQSANQRVSSDFAVRLGEELTAIAKGTSS 225
Query: 674 SYAIKKKDELERVA 715
A +K+D++ + A
Sbjct: 226 --AFEKRDQIHKTA 237
>UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S7 -
Astasia longa (Euglenophycean alga)
Length = 178
Score = 40.3 bits (90), Expect = 0.047
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +2
Query: 359 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR-EDSTRIGRAGTVRRQAVD 535
+ GKK +A I + + I + ENPL + A+ N+ P E T+ + G + + ++
Sbjct: 32 SKGKKNIARYIFYKSMQNIEKIKNENPLDIFKKAVDNATPSIELRTQKRKKGQISKISIK 91
Query: 536 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 709
RR A+ + A++ R+ K I + + E+++A ++ A++KK+E+E+
Sbjct: 92 TKLERRNKIALKFIINSAKK---RSEKNIIQKLQGEILDAY--NNTGAAVQKKEEIEK 144
>UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1;
Methanococcoides methylutens|Rep: 30S ribosomal protein
S7P - Methanococcoides methylutens
Length = 69
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 584 GAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAK 718
GA ++AF++ + +E +A ELI A+ + ++I +KD ERVAK
Sbjct: 22 GANQSAFKSKRXASESLASELIAASNRDAKCFSINRKDGKERVAK 66
>UniRef50_Q9AIG8 Cluster: 30S ribosomal protein S7; n=2; Candidatus
Carsonella ruddii|Rep: 30S ribosomal protein S7 -
Carsonella ruddii
Length = 156
Score = 39.1 bits (87), Expect = 0.11
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +2
Query: 359 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDV 538
NNGKK +A +I ++ II + +NP ++ + N P + + G+V + + +
Sbjct: 32 NNGKKNLAQKIFYYSISIISIRLNKNPFILIKKILYNVQPDFEIKKKKIGGSVYKIPIKI 91
Query: 539 SPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERV 712
+ R + ++ W++ + + RN + ELI++ +NS + K+KDEL ++
Sbjct: 92 NLKRSLMFSMKWIV----KNSKLRNENGYKNKLVGELIDSY--YNNSLSTKQKDELNKI 144
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.76
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +2
Query: 215 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 394
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 395 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 511
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 59 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 238
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 239 KEKYAKYLPH 268
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 292
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 602 FRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 709
FRN+K I + V D+L+ KGSS + K+K+EL++
Sbjct: 126 FRNVKDIEDHVKDKLLLVKKGSSTELSDKEKNELKK 161
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +2
Query: 50 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 220
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 221 QDYISVKEKYAKYLPHSAG 277
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_P46745 Cluster: Mitochondrial ribosomal protein S7; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S7 - Prototheca wickerhamii
Length = 222
Score = 33.9 bits (74), Expect = 4.1
Identities = 28/100 (28%), Positives = 46/100 (46%)
Frame = +2
Query: 416 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 595
+LL + L+VL A+ N P + ++ RAG +S + AI + A++
Sbjct: 113 NLLETISVLEVLSIALKNVTPSVELRKVRRAGNTFLIPAILSQHKANTLAIRWVIESAKK 172
Query: 596 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 715
+ + AEC+ADE+ A A +K+DEL A
Sbjct: 173 KQQNSKQNFAECLADEIYQAY--LKQGKARQKRDELHSAA 210
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 459 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 545
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_Q4E4M2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 979
Score = 33.5 bits (73), Expect = 5.4
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +2
Query: 515 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD---ELINAAKGSSNSYAI 685
V++QAVD +RRV A+ L + F + + +CVAD EL A++ S A+
Sbjct: 703 VQQQAVDEEEMRRVQTAL-SLSRQSEHLLFVENERLLKCVADKERELAEASQQLQQSEAM 761
Query: 686 --KKKDELER 709
K +DELER
Sbjct: 762 AGKVRDELER 771
>UniRef50_O96282 Cluster: Putative uncharacterized protein PFB0950w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0950w - Plasmodium falciparum
(isolate 3D7)
Length = 307
Score = 33.1 bits (72), Expect = 7.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 658 SCIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSA 548
SCI IC+ +C C I C +C C+ C+ SA
Sbjct: 215 SCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 251
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 7.1
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 323 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 496
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 497 IG 502
IG
Sbjct: 535 IG 536
>UniRef50_A6EW85 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 279
Score = 32.7 bits (71), Expect = 9.4
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 518 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 679
RR+A DV RV W++ T EAAF ++ IA+ A + A KG+S+ +
Sbjct: 47 RRRARDVFATDRVQTNRWIV-TVLDEAAFAELQNIAQAPASRVDAAKKGNSHRH 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,803,978
Number of Sequences: 1657284
Number of extensions: 14379728
Number of successful extensions: 37631
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 35624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37392
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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