Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2c17
(177 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 1.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 1.8
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 20 3.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 3.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 3.1
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 20 3.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 20 3.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 5.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 19 7.3
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 19 7.3
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 18 9.6
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 1.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 125 FR*TCRKCYK 96
+R TCRKC+K
Sbjct: 371 WRLTCRKCFK 380
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = +1
Query: 49 GILACLQISLAICITIL*HFLHVYLNVCLYV 141
G CL++ + + + H Y+ CL V
Sbjct: 229 GNFTCLEVVFVLKRRLGYYLFHTYIPTCLIV 259
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 75 SCDL--YHHFVTFSTCLSKCLSL 137
+CDL + V S C + CLSL
Sbjct: 45 TCDLLSFKGQVNDSACAANCLSL 67
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = +1
Query: 37 KSFLGILACLQISLAICITIL*HFLHVYLNVCLYV 141
K+ G +CL++ L + + +Y+ C+ V
Sbjct: 222 KTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLV 256
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 58 LIFPKNFSYKLLRFTI 11
L+F + FSY L++ I
Sbjct: 235 LLFKREFSYYLIQIYI 250
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = +1
Query: 37 KSFLGILACLQISLAICITIL*HFLHVYLNVCLYV 141
K+ G +CL++ L + + +Y+ C+ V
Sbjct: 222 KTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLV 256
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 58 LIFPKNFSYKLLRFTI 11
L+F + FSY L++ I
Sbjct: 235 LLFKREFSYYLIQIYI 250
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 75 SCDL--YHHFVTFSTCLSKCLSL 137
+CDL + V S C + CLSL
Sbjct: 45 TCDLLSFKGQVNDSACAANCLSL 67
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 45 FGNISMSTN*SCD 83
+GNIS N SCD
Sbjct: 571 YGNISHFINHSCD 583
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 160 IIYFVTIHKDKH 125
+IYFV HK K+
Sbjct: 1491 MIYFVVEHKKKN 1502
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 121 DKHVENVTKW 92
DK+VE + KW
Sbjct: 338 DKNVEALAKW 347
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 18.6 bits (36), Expect = 7.3
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +1
Query: 49 GILACLQISLAICITIL*HFLHVYLNVCLYV 141
G C+QI + + H H Y+ L V
Sbjct: 198 GNFTCIQIVFNLRRRLGYHLFHTYIPSALIV 228
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 18.2 bits (35), Expect = 9.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 172 FFDYIIYFVTIHKDKHLDKHVE 107
+F I FV K+K + H+E
Sbjct: 182 YFGLAISFVFGMKEKRKEHHLE 203
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,365
Number of Sequences: 438
Number of extensions: 721
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used: 2593980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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