Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2c15
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical ...    29   5.2  
U80450-4|AAB37829.1|  926|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AL032648-2|CAA21699.2|  621|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical
           protein T04B2.4 protein.
          Length = 344

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 517 CSDVCGVDVWTNLDVNFYCKFYKWG 591
           C    G+D+WT L   F   F KWG
Sbjct: 75  CLSTAGIDIWTLLTNYFGAMFAKWG 99


>AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical
           protein F54D12.7 protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 568 YCKFYKWGDELLKTQPHVVANSGHESI-IKTISEP-KQNDSLDIIVSAGTNEKPKDKAIQ 741
           YC  Y  GD +L      + +SG+ES+  K ++ P K  D  + ++   TNE  K+  I+
Sbjct: 64  YCLLYAVGDIILVRNDQDIFSSGNESVSFKILNSPAKCADRAEDMLLGITNEYNKNN-IE 122

Query: 742 SPEGSSSPI 768
           S E   S I
Sbjct: 123 SYEIQVSEI 131


>U80450-4|AAB37829.1|  926|Caenorhabditis elegans Hypothetical
           protein M01E11.3 protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +1

Query: 223 LKELSDRCENQFLNKQIKSAIDQCPQDPRKEFKCLLFYDMANRLCLATNTS 375
           +K++ +    QFLN +I  A+D   + P    K ++   M  ++  +TN S
Sbjct: 45  VKQIGELVIQQFLNSKISEALDPTMKIPTSAVKVVIVKRMIFQVISSTNIS 95


>AL032648-2|CAA21699.2|  621|Caenorhabditis elegans Hypothetical
           protein Y54G9A.3 protein.
          Length = 621

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/66 (24%), Positives = 26/66 (39%)
 Frame = +1

Query: 262 NKQIKSAIDQCPQDPRKEFKCLLFYDMANRLCLATNTSQITLKEDYVAEINKEQTLDNVC 441
           N  ++S++D  PQDP +    LL     + L    N     +KE   A++     + N  
Sbjct: 9   NGSLRSSLDDSPQDPEESETFLLGMVTGDGLGKMFNARYRNIKEKKAAKMTYRAMIYNCL 68

Query: 442 SEAKNW 459
                W
Sbjct: 69  ERPTGW 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.132    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,800,066
Number of Sequences: 27780
Number of extensions: 378914
Number of successful extensions: 1152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)