Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2c14
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17392-1|CAA76759.1| 122|Homo sapiens prefoldin subunit 1 protein. 87 8e-17
AK223394-1|BAD97114.1| 122|Homo sapiens prefoldin 1 variant pro... 87 8e-17
BC011869-1|AAH11869.1| 122|Homo sapiens prefoldin subunit 1 pro... 86 1e-16
BC006202-1|AAH06202.1| 122|Homo sapiens prefoldin subunit 1 pro... 86 1e-16
BC003620-1|AAH03620.1| 122|Homo sapiens prefoldin subunit 1 pro... 86 1e-16
BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and pol... 33 1.5
BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and pol... 33 1.5
AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein. 33 1.5
AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein. 33 1.5
BX571742-1|CAE11868.1| 902|Homo sapiens hypothetical protein pr... 32 1.9
BC040956-1|AAH40956.1| 699|Homo sapiens zinc finger CCCH-type, ... 32 1.9
BC033105-1|AAH33105.1| 699|Homo sapiens zinc finger CCCH-type, ... 32 1.9
BC025308-1|AAH25308.1| 699|Homo sapiens zinc finger CCCH-type, ... 32 1.9
BC002935-1|AAH02935.1| 447|Homo sapiens ZC3HAV1 protein protein. 32 1.9
Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein. 31 5.9
BC041070-1|AAH41070.1| 436|Homo sapiens keratin 34 protein. 30 7.8
>Y17392-1|CAA76759.1| 122|Homo sapiens prefoldin subunit 1 protein.
Length = 122
Score = 86.6 bits (205), Expect = 8e-17
Identities = 45/120 (37%), Positives = 67/120 (55%)
Frame = +2
Query: 122 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 301
MA VDLELK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 302 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 481
YE + RMF+ E I L +K +I +L +K L L E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERRLKEAEDNIREMLMARR 120
>AK223394-1|BAD97114.1| 122|Homo sapiens prefoldin 1 variant
protein.
Length = 122
Score = 86.6 bits (205), Expect = 8e-17
Identities = 44/120 (36%), Positives = 68/120 (56%)
Frame = +2
Query: 122 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 301
MA VDLELK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 302 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 481
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKVAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC011869-1|AAH11869.1| 122|Homo sapiens prefoldin subunit 1
protein.
Length = 122
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/120 (36%), Positives = 68/120 (56%)
Frame = +2
Query: 122 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 301
MA VDLELK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 302 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 481
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC006202-1|AAH06202.1| 122|Homo sapiens prefoldin subunit 1
protein.
Length = 122
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/120 (36%), Positives = 68/120 (56%)
Frame = +2
Query: 122 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 301
MA VDLELK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 302 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 481
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC003620-1|AAH03620.1| 122|Homo sapiens prefoldin subunit 1
protein.
Length = 122
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/120 (36%), Positives = 68/120 (56%)
Frame = +2
Query: 122 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 301
MA VDLELK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 302 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 481
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and
polyadenylation factor subunit, homolog (S. cerevisiae)
protein.
Length = 1555
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/109 (22%), Positives = 52/109 (47%)
Frame = +2
Query: 185 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 364
+T KTI + + + + +T++E+D L +K+ +S + +++ L H K
Sbjct: 328 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 386
Query: 365 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 511
Q++ ++ R+ D+N R L L + D +++KR E + E
Sbjct: 387 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 433
>BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and
polyadenylation factor subunit, homolog (S. cerevisiae)
protein.
Length = 1555
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/109 (22%), Positives = 52/109 (47%)
Frame = +2
Query: 185 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 364
+T KTI + + + + +T++E+D L +K+ +S + +++ L H K
Sbjct: 328 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 386
Query: 365 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 511
Q++ ++ R+ D+N R L L + D +++KR E + E
Sbjct: 387 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 433
>AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein.
Length = 725
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/109 (22%), Positives = 52/109 (47%)
Frame = +2
Query: 185 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 364
+T KTI + + + + +T++E+D L +K+ +S + +++ L H K
Sbjct: 328 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 386
Query: 365 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 511
Q++ ++ R+ D+N R L L + D +++KR E + E
Sbjct: 387 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 433
>AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.
Length = 1644
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/109 (22%), Positives = 52/109 (47%)
Frame = +2
Query: 185 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 364
+T KTI + + + + +T++E+D L +K+ +S + +++ L H K
Sbjct: 417 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 475
Query: 365 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 511
Q++ ++ R+ D+N R L L + D +++KR E + E
Sbjct: 476 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 522
>BX571742-1|CAE11868.1| 902|Homo sapiens hypothetical protein
protein.
Length = 902
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 421
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 422 LNH 430
L+H
Sbjct: 514 LDH 516
>BC040956-1|AAH40956.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 421
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 422 LNH 430
L+H
Sbjct: 514 LDH 516
>BC033105-1|AAH33105.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 421
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 422 LNH 430
L+H
Sbjct: 514 LDH 516
>BC025308-1|AAH25308.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 421
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 422 LNH 430
L+H
Sbjct: 514 LDH 516
>BC002935-1|AAH02935.1| 447|Homo sapiens ZC3HAV1 protein protein.
Length = 447
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 421
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 154 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 213
Query: 422 LNH 430
L+H
Sbjct: 214 LDH 216
>Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.
Length = 1937
Score = 30.7 bits (66), Expect = 5.9
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +2
Query: 236 RMQMHTNLTQREIDVLPPGTKTYESMARMFVQSD-LEHIKQNLRQKTNTLISRIDDLNNR 412
R + Q E V K +SMA + Q D L+ +KQ L ++ + L DDL++
Sbjct: 1178 RRDLEEATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQKLEKEKSELKMETDDLSSN 1237
Query: 413 KVCLNHTLNESES---NIRDLIQQKRMKNENQ 499
++ E ++ D + + + K E Q
Sbjct: 1238 AEAISKAKGNLEKMCRSLEDQVSELKTKEEEQ 1269
>BC041070-1|AAH41070.1| 436|Homo sapiens keratin 34 protein.
Length = 436
Score = 30.3 bits (65), Expect = 7.8
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = +2
Query: 254 NLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRK------ 415
N +R +D L ES ++ +L +K+N ++ NTL S++ D N +
Sbjct: 202 NSIRRILDELTLCKSDLESQVES-LREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPT 260
Query: 416 VCLNHTLNESESNIRDLIQQKRMKNENQPAAES 514
V LN LNE+ S L++ R + E A ++
Sbjct: 261 VDLNQVLNETRSQYEALVETNRREVEQWFATQT 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,383,098
Number of Sequences: 237096
Number of extensions: 1590828
Number of successful extensions: 3779
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3779
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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