Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2c10
         (734 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132753-1|AAI32754.1|  226|Homo sapiens LOC123688 protein protein.   107   4e-23
AK126453-1|BAC86556.1|  172|Homo sapiens protein ( Homo sapiens ...    77   7e-14
Y00762-1|CAA68731.1|  457|Homo sapiens protein ( Human mRNA for ...    33   0.80 
X02502-1|CAA26344.1|  457|Homo sapiens acetylcholine receptor pr...    33   0.80 
S77094-1|AAD14247.1|  457|Homo sapiens nicotinic acetylcholine r...    33   0.80 
BC006314-1|AAH06314.1|  269|Homo sapiens CHRNA1 protein protein.       33   0.80 
AC018890-1|AAY14687.1|  457|Homo sapiens unknown protein.              33   0.80 
AY222296-1|AAO64395.1|  239|Homo sapiens myeloid/lymphoid or mix...    32   1.9  
AK001237-1|BAA91573.1|  589|Homo sapiens protein ( Homo sapiens ...    32   1.9  

>BC132753-1|AAI32754.1|  226|Homo sapiens LOC123688 protein protein.
          Length = 226

 Score =  107 bits (257), Expect = 4e-23
 Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
 Frame = +3

Query: 123 RPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHSPYGYVLKI 302
           +P    EQ   L E ++G+ V  +  L  YDD+N+ +           T   P  YVLKI
Sbjct: 14  KPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSK-------TKDGPTEYVLKI 66

Query: 303 MNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIE--DLGG--KKHAVRLL 470
            N+  S+N  ++E QN I+ FL                +  S+   D G   K + VRLL
Sbjct: 67  SNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKSYLVRLL 126

Query: 471 EYVPGELLKNCPLSEALLYQLGEFVANLDNKLQNFNH---SGLVSRQHMWMLSMVPELEK 641
            Y+PG  +   P+S  LLY++G+  A LD  LQ F+H   S L     +W L  VP LEK
Sbjct: 127 TYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKNVPLLEK 186

Query: 642 FKYVIKDSEKLDLAEEVIEEFKYAVVPRL 728
           + Y +  +   ++ E VI  FK  V+ +L
Sbjct: 187 YLYALGQNRNREIVEHVIHLFKEEVMTKL 215


>AK126453-1|BAC86556.1|  172|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44489 fis, clone UTERU2035114. ).
          Length = 172

 Score = 77.0 bits (181), Expect = 7e-14
 Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
 Frame = +3

Query: 123 RPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHSPYGYVLKI 302
           +P    EQ   L E ++G+ V  +  L  YDD+N+ +           T   P  YVLKI
Sbjct: 14  KPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSK-------TKDGPTEYVLKI 66

Query: 303 MNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIE--DLGG--KKHAVRLL 470
            N+  S+N  ++E QN I+ FL                +  S+   D G   K + VRLL
Sbjct: 67  SNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKSYLVRLL 126

Query: 471 EYVPGELLKNCPLSEALLYQLGEFVANLDNKLQ 569
            Y+PG  +   P+S  LLY++G+  A LD  LQ
Sbjct: 127 TYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQ 159


>Y00762-1|CAA68731.1|  457|Homo sapiens protein ( Human mRNA for
           muscle acetylcholine receptor alpha-subunit. ).
          Length = 457

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 24/71 (33%), Positives = 35/71 (49%)
 Frame = +3

Query: 90  AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 269
           AKL  +   V+RP+ DH QV  +   L  I ++++ E+N     N +L +     N L  
Sbjct: 29  AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87

Query: 270 NHSPYGYVLKI 302
           N   YG V KI
Sbjct: 88  NPDDYGGVKKI 98


>X02502-1|CAA26344.1|  457|Homo sapiens acetylcholine receptor
           protein.
          Length = 457

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 24/71 (33%), Positives = 35/71 (49%)
 Frame = +3

Query: 90  AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 269
           AKL  +   V+RP+ DH QV  +   L  I ++++ E+N     N +L +     N L  
Sbjct: 29  AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87

Query: 270 NHSPYGYVLKI 302
           N   YG V KI
Sbjct: 88  NPDDYGGVKKI 98


>S77094-1|AAD14247.1|  457|Homo sapiens nicotinic acetylcholine
           receptor alpha subunit|AChR protein.
          Length = 457

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 24/71 (33%), Positives = 35/71 (49%)
 Frame = +3

Query: 90  AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 269
           AKL  +   V+RP+ DH QV  +   L  I ++++ E+N     N +L +     N L  
Sbjct: 29  AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87

Query: 270 NHSPYGYVLKI 302
           N   YG V KI
Sbjct: 88  NPDDYGGVKKI 98


>BC006314-1|AAH06314.1|  269|Homo sapiens CHRNA1 protein protein.
          Length = 269

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 24/71 (33%), Positives = 35/71 (49%)
 Frame = +3

Query: 90  AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 269
           AKL  +   V+RP+ DH QV  +   L  I ++++ E+N     N +L +     N L  
Sbjct: 29  AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87

Query: 270 NHSPYGYVLKI 302
           N   YG V KI
Sbjct: 88  NPDDYGGVKKI 98


>AC018890-1|AAY14687.1|  457|Homo sapiens unknown protein.
          Length = 457

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 24/71 (33%), Positives = 35/71 (49%)
 Frame = +3

Query: 90  AKLLLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 269
           AKL  +   V+RP+ DH QV  +   L  I ++++ E+N     N +L +     N L  
Sbjct: 29  AKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYN-LKW 87

Query: 270 NHSPYGYVLKI 302
           N   YG V KI
Sbjct: 88  NPDDYGGVKKI 98


>AY222296-1|AAO64395.1|  239|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia 5 protein.
          Length = 239

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 23/74 (31%), Positives = 32/74 (43%)
 Frame = -1

Query: 716 HSILEFFYHLFC*IQLLRVLDHILEFLQLWDHREHPHVLSADQTGVVEVLQFVIQISDKF 537
           H I +  + L   IQL   + H L  + LWD    P     +Q  +V  L  V+  S K 
Sbjct: 111 HLIKDLHFFLRVLIQLYHRIPHKLHIIPLWD--RDPSTSLLEQGHIVHYLSQVLISSPKD 168

Query: 536 SELIQESFGQGTVL 495
             + Q    QG+VL
Sbjct: 169 QTVFQHLLLQGSVL 182


>AK001237-1|BAA91573.1|  589|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10375 fis, clone NT2RM2001950. ).
          Length = 589

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = -1

Query: 665 RVLDHILEFLQLWDHREHPHVLSADQTGVVEVLQFVIQISDKFSELIQESFGQGTVLQEL 486
           R+  +  EFL  W   E+  + SA Q  ++ +   V    + F+ L   +F    VL+++
Sbjct: 304 RLYRYAAEFLTSW---ENHRLESAYQNHLI-LKVLVFNFLNCFASLFYIAF----VLKDM 355

Query: 485 SRYILQQSYGVFL-ASQVLDGV*MTEYIPYWLGTGHG 378
              +L+QS    L  SQ+L+ + M  ++PYWL   HG
Sbjct: 356 K--LLRQSLATLLITSQILNQI-MESFLPYWLQRKHG 389


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,786,109
Number of Sequences: 237096
Number of extensions: 2212993
Number of successful extensions: 5740
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5730
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)