Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2c10
(734 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.32
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.32
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.3
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 24 1.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.1
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 26.2 bits (55), Expect = 0.32
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 144 QVKL---LAERLYGISVLDLTELN--GYDDKNYKLTEDPNMKNPLITNH 275
Q+KL L E G ++L N G+DD LT D N +NP + +
Sbjct: 236 QIKLVEGLEEEAEGAITVELQSENIPGFDDYMASLTPDTNRRNPWFSEY 284
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 26.2 bits (55), Expect = 0.32
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 144 QVKL---LAERLYGISVLDLTELN--GYDDKNYKLTEDPNMKNPLITNH 275
Q+KL L E G ++L N G+DD LT D N +NP + +
Sbjct: 326 QIKLVEGLEEEAEGAITVELQSENIPGFDDYMASLTPDTNRRNPWFSEY 374
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 402 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 435
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 402 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 435
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 402 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 435
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 402 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 435
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 402 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 435
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 402 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 435
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 470 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 503
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 633 LEKFKYVIKDSEKLDLAEEVIEEFKYA--VVPRL 728
L++ +++ +K D ++E+I ++K+A VV RL
Sbjct: 470 LKELRFITDRMKKADESDEIISDWKFAAMVVDRL 503
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 116 GYPSDNRPRAGEAT 157
GYP D +PRAG T
Sbjct: 642 GYPFDRQPRAGVET 655
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 386 LSQASTEYIRSSTLHRGPGRQETRRKTAGVCTGRALEEL 502
L + +++YI STL R++ ++ T G+ R+ L
Sbjct: 327 LKKVNSKYILKSTLTPKLARKQFQKNTTGLERSRSWSSL 365
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/53 (15%), Positives = 27/53 (50%)
Frame = +3
Query: 477 VPGELLKNCPLSEALLYQLGEFVANLDNKLQNFNHSGLVSRQHMWMLSMVPEL 635
V G+++ + +S ++ GE+ +N+ H+ ++ + + ++P++
Sbjct: 476 VHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIPKV 528
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/53 (15%), Positives = 27/53 (50%)
Frame = +3
Query: 477 VPGELLKNCPLSEALLYQLGEFVANLDNKLQNFNHSGLVSRQHMWMLSMVPEL 635
V G+++ + +S ++ GE+ +N+ H+ ++ + + ++P++
Sbjct: 476 VHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIPKV 528
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDSKIDLRSRTKEE 34
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 636 EKFKYVIKDSEKLDLAEEVIEE 701
EKFK + + K+DL EE
Sbjct: 13 EKFKQLRNEDNKIDLRSRTKEE 34
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 261 LITNHSPYGYVLKIMNSIDSQNVGVVEAQNE 353
++T SPYGYV I + +V QNE
Sbjct: 318 ILTPVSPYGYVKPISPEQEELIHRLVYFQNE 348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,417
Number of Sequences: 438
Number of extensions: 4310
Number of successful extensions: 29
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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