Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2c09
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009932-1|AAH09932.1|  209|Homo sapiens glycolipid transfer pro...    48   4e-05
AY372532-1|AAR87373.1|  209|Homo sapiens glycolipid transfer pro...    48   4e-05
AY372531-1|AAR85985.1|  209|Homo sapiens glycolipid transfer pro...    48   4e-05
AY372530-1|AAR85984.1|  209|Homo sapiens glycolipid transfer pro...    48   4e-05
AF209704-1|AAF33210.1|  209|Homo sapiens glycolipid transfer pro...    48   4e-05

>BC009932-1|AAH09932.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +2

Query: 185 KAPVTEGVLWLNRALLFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQ 361
           K   T  ++WL R L F ++    I +  + +   N+  V  TKAYE ++KKYH W+ Q+
Sbjct: 87  KVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQK 146

Query: 362 LFIFICKMSPTFAQMIKS 415
           +F      +P  +  +K+
Sbjct: 147 IFQAALYAAPYKSDFLKA 164


>AY372532-1|AAR87373.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +2

Query: 185 KAPVTEGVLWLNRALLFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQ 361
           K   T  ++WL R L F ++    I +  + +   N+  V  TKAYE ++KKYH W+ Q+
Sbjct: 87  KVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQK 146

Query: 362 LFIFICKMSPTFAQMIKS 415
           +F      +P  +  +K+
Sbjct: 147 IFQAALYAAPYKSDFLKA 164


>AY372531-1|AAR85985.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +2

Query: 185 KAPVTEGVLWLNRALLFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQ 361
           K   T  ++WL R L F ++    I +  + +   N+  V  TKAYE ++KKYH W+ Q+
Sbjct: 87  KVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQK 146

Query: 362 LFIFICKMSPTFAQMIKS 415
           +F      +P  +  +K+
Sbjct: 147 IFQAALYAAPYKSDFLKA 164


>AY372530-1|AAR85984.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +2

Query: 185 KAPVTEGVLWLNRALLFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQ 361
           K   T  ++WL R L F ++    I +  + +   N+  V  TKAYE ++KKYH W+ Q+
Sbjct: 87  KVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQK 146

Query: 362 LFIFICKMSPTFAQMIKS 415
           +F      +P  +  +K+
Sbjct: 147 IFQAALYAAPYKSDFLKA 164


>AF209704-1|AAF33210.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +2

Query: 185 KAPVTEGVLWLNRALLFFELVFVDILENLQAKKEINMKYV-FTKAYEGSVKKYHSWVTQQ 361
           K   T  ++WL R L F ++    I +  + +   N+  V  TKAYE ++KKYH W+ Q+
Sbjct: 87  KVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQK 146

Query: 362 LFIFICKMSPTFAQMIKS 415
           +F      +P  +  +K+
Sbjct: 147 IFQAALYAAPYKSDFLKA 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,397,850
Number of Sequences: 237096
Number of extensions: 1726493
Number of successful extensions: 2731
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2731
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)