Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2c09
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-16|AAP46261.1|  304|Caenorhabditis elegans Hypothetical...    38   0.008
AC090999-15|AAK26154.1|  231|Caenorhabditis elegans Hypothetical...    38   0.008
AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p...    34   0.094
AF039711-9|ABS19467.1|  281|Caenorhabditis elegans Temporarily a...    32   0.38 
AC092690-1|AAK73856.2|  427|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z68316-1|CAA92680.1|  213|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AC090999-16|AAP46261.1|  304|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.14b protein.
          Length = 304

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +2

Query: 197 TEGVLWLNRALLFFELVFVDIL----ENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQL 364
           TEG+LWL R L F   +  +++      L   K  ++      AY  S+K++H ++ +Q 
Sbjct: 184 TEGLLWLKRGLQFMLELLTEMVTAYNSGLPRDKTEDLSGAVATAYGKSLKRHHGFIAKQA 243

Query: 365 FIFICKMSPTFAQMIKS 415
           F  +    P   Q++K+
Sbjct: 244 FKVVTMAVPYRRQILKA 260


>AC090999-15|AAK26154.1|  231|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.14a protein.
          Length = 231

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +2

Query: 197 TEGVLWLNRALLFFELVFVDIL----ENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQL 364
           TEG+LWL R L F   +  +++      L   K  ++      AY  S+K++H ++ +Q 
Sbjct: 111 TEGLLWLKRGLQFMLELLTEMVTAYNSGLPRDKTEDLSGAVATAYGKSLKRHHGFIAKQA 170

Query: 365 FIFICKMSPTFAQMIKS 415
           F  +    P   Q++K+
Sbjct: 171 FKVVTMAVPYRRQILKA 187


>AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p450
           family protein 33C1 protein.
          Length = 497

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +2

Query: 359 QLFIFICKMSPTFAQMIKSFGVDGDIKSF-ETKLASFNITLHLNRCKIDDFFKDNN 523
           +L IF+    P FA+++     +G IK+F +T LA FN  +  +R +ID  F+D N
Sbjct: 209 KLHIFLAMNIPIFAKLLPESLYEGPIKTFRDTTLAFFNKQIEAHRHRID--FEDLN 262


>AF039711-9|ABS19467.1|  281|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 296 protein.
          Length = 281

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +2

Query: 179 NGKAPVTEGVLWLNRALLFF-ELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSWVT 355
           NGK      +L LNRAL F  E ++  +     A  + ++  +  + Y+G++ K+H W+ 
Sbjct: 163 NGKESGAVAILHLNRALEFIVEFMYAAVA----ATNDDSIPKICKECYDGTLAKHHPWII 218

Query: 356 QQLFIFICKMSPTFAQMI 409
           +          PT  +M+
Sbjct: 219 RTAVKVAVYTLPTREKML 236


>AC092690-1|AAK73856.2|  427|Caenorhabditis elegans Hypothetical
           protein BE0003N10.2 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 699 AHNLTSIKTYKPLNHCNWCLNFFY 628
           AHN TS  T+K  ++C++C NF +
Sbjct: 171 AHNFTSY-TFKAPHYCDYCRNFLW 193


>Z68316-1|CAA92680.1|  213|Caenorhabditis elegans Hypothetical
           protein K08E4.2 protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +2

Query: 197 TEGVLWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAYEGSVKKYHSW 349
           T  ++ LNRAL F     +D+L+ +    + N+  +   +Y+  + + HSW
Sbjct: 101 TGHLMVLNRALEFV----IDLLDGVFTSNDENVSTIARSSYDKHLSQLHSW 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,346,068
Number of Sequences: 27780
Number of extensions: 304957
Number of successful extensions: 679
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)