Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2b17
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 85 7e-17
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 57 1e-08
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 55 7e-08
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 54 2e-07
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 54 2e-07
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 50 3e-06
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 50 3e-06
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 49 3e-06
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 48 1e-05
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 48 1e-05
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 46 3e-05
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 46 3e-05
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 46 3e-05
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 46 4e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 45 5e-05
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 45 7e-05
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 45 7e-05
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 42 4e-04
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 42 4e-04
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 42 5e-04
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 42 5e-04
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 42 5e-04
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 42 5e-04
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 42 5e-04
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 41 9e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 41 0.001
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 40 0.002
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 39 0.004
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 39 0.005
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 37 0.019
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 36 0.025
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 35 0.058
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 35 0.058
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.077
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 35 0.077
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 34 0.13
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 34 0.13
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 33 0.18
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 33 0.23
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 33 0.23
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 32 0.41
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 31 0.94
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 31 1.2
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z79753-1|CAB02086.1| 249|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 6.7
U39471-1|AAA80132.4| 461|Caenorhabditis elegans Intestinal acid... 28 6.7
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 28 6.7
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 28 8.8
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 8.8
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 84.6 bits (200), Expect = 7e-17
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Frame = +2
Query: 155 VGKTSLTHLIAHNKPILSPGW----TVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNG 322
VGKTSL H IA G T+G +V + H+Y+ GT Q T +ELWD+GG
Sbjct: 19 VGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGTPEQRTELLELWDIGGMVA 78
Query: 323 HRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWL 424
HR VF++ G ILVHDLTN++S+ NL WL
Sbjct: 79 HRQAAQVFFEGAVGAILVHDLTNKRSEENLATWL 112
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 646 GSTNSVKLTRFFDKVIERRYYSRVSPFSDKRRIPPYIMATSTP 774
GS NS+ L+RFFD ++R + ++ S P M + P
Sbjct: 178 GSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTKPRSMTPNLP 220
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/100 (32%), Positives = 50/100 (50%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGK+SL A N S + V+ K+ Q +++WD G R
Sbjct: 20 GVGKSSLLLRFADNT--FSENYITTIGVDFKIRTMDINGQRVK---LQIWDTAGQERFRT 74
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSS 451
+Y+ THG+++V+D+TN +S N+++WL EI N S
Sbjct: 75 ITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS 114
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 54.8 bits (126), Expect = 7e-08
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Frame = +2
Query: 158 GKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRNTR 337
GK+ + A N + T+G V+ KL K G ++ +ELWD G +R
Sbjct: 18 GKSCILLRFAENSFRMDHISTLG--VDFKLKTIKLG---RDKIRLELWDTAGMERYRTIY 72
Query: 338 DVFYQPTHGIILVHDLTNRKSQVNLQK-WLAEILNQDSSNPTLQHV----DVDPEQ 490
+ +Y HG++ V+D+TN KS NL+K WL EI N L V D+D E+
Sbjct: 73 NSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQER 128
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFFVELWDVGGS 316
GVGKTS H N TVG + K YK G + Q ++LWD G
Sbjct: 17 GVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVL-LQLWDTAGQ 75
Query: 317 NGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
R+ F++ G IL+ D+TN +S +N++ WL+++
Sbjct: 76 ERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFFVELWDVGGS 316
GVGKTS H N TVG + K YK G + Q ++LWD G
Sbjct: 17 GVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVL-LQLWDTAGQ 75
Query: 317 NGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
R+ F++ G IL+ D+TN +S +N++ WL+++
Sbjct: 76 ERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/95 (26%), Positives = 50/95 (52%)
Frame = +2
Query: 149 VGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHR 328
+GVGKT + + + G T+G +K +G + + +++WD GG R
Sbjct: 19 MGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKT-LVVDGKRVK----LQIWDTGGQERFR 73
Query: 329 NTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ +GI+L +D+T ++S +LQ+W+ ++
Sbjct: 74 TITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDV 108
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 155 VGKTSLTHLIAHN--KPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHR 328
VGKT H HN KP+ + T+G VK K ++LWD G R
Sbjct: 213 VGKTCFLHRFCHNRFKPLFNA--TIGVDFTVKTMKIPPN----RAIAMQLWDTAGQERFR 266
Query: 329 NTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+ +++ G++L+ D+T+ +S +N++ W+ +
Sbjct: 267 SITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSV 301
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/94 (29%), Positives = 51/94 (54%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGK+ L A + S T+G +++ + +G T +++WD G R
Sbjct: 21 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG----KTIKLQIWDTAGQERFRT 75
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ HGII+V+D+T++++ N+++WL EI
Sbjct: 76 ITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEI 109
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/94 (29%), Positives = 44/94 (46%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGKT L I PG + V+ + K G + +++WD G R+
Sbjct: 17 GVGKTCLVRKFTQG--IFPPGQSATIGVDFMIKTVKVGN---DKIKLQIWDTAGQERFRS 71
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ H I+LV+D++ + S L +WL EI
Sbjct: 72 ITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEI 105
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +2
Query: 155 VGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRNT 334
VGK+SL K TVG ++ + + G + + ++LWD G R+
Sbjct: 28 VGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVK----LQLWDTAGQEKFRSI 83
Query: 335 RDVFYQPTHGIILVHDLTNRKSQVNLQKWLAE-ILNQDSSNPT 460
+Y+ + G++ ++D TNR+S +++ W+ E LN +P+
Sbjct: 84 TKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPS 126
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +2
Query: 152 GVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNG 322
GVGKT + + A N +S T+G ++K + K G + + +++WD G
Sbjct: 19 GVGKTCILYRFSDDAFNTTFIS---TIGIDFKIKTIELK-GKKIK----LQIWDTAGQER 70
Query: 323 HRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ GI+LV+D+TN KS N+ KWL I
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +2
Query: 152 GVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNG 322
GVGKT + + A N +S T+G ++K + K G + + +++WD G
Sbjct: 19 GVGKTCILYRFSDDAFNTTFIS---TIGIDFKIKTIELK-GKKIK----LQIWDTAGQER 70
Query: 323 HRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ GI+LV+D+TN KS N+ KWL I
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGK++L L+ + P T VE YK+ + + +WD G R+
Sbjct: 16 GVGKSNL--LLRFTDELFDPIHTTTLGVEFG---YKDLQIDKYKVRLRVWDTCGQENFRS 70
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ G +LV+D+T RKS V+L++WL+++
Sbjct: 71 IIRAYYRNALGALLVYDITCRKSFVHLEQWLSDL 104
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
+++WD G R +Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
+++WD G R +Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
+++WD G R +Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/93 (30%), Positives = 46/93 (49%)
Frame = +2
Query: 155 VGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRNT 334
VGK+SL NK T+ S + K E QA + +WD G +
Sbjct: 23 VGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNV-EDCQAD----LHIWDTAGQEKYHAL 77
Query: 335 RDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
++Y+ ++G++LV D+T+RKS ++ W+ EI
Sbjct: 78 GPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEI 110
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/107 (25%), Positives = 47/107 (43%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGK++L N+ L T+G + EG T ++WD G +R
Sbjct: 21 GVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISV-EG----KTVKAQIWDTAGQERYRA 75
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 472
+Y+ G +LV+D+ + N+++WL E+ + N + V
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPV 122
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/105 (23%), Positives = 49/105 (46%)
Frame = +2
Query: 149 VGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHR 328
+GVGK+ L H K + T+G ++ + G + + +++WD G R
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS-GQKIK----LQIWDTAGQERFR 74
Query: 329 NTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 463
+Y+ G ++V+D+T R + +L WLA+ + + N +
Sbjct: 75 AVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAI 119
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/101 (25%), Positives = 45/101 (44%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGK++L N+ L T+G + EG T ++WD G +R
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV-EG----KTVKAQIWDTAGQERYRA 75
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
+Y+ G +LV+D+ + N+++WL E+ + N
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQN 116
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGKTS+ HN + T+G +K+ E T +++WD+ G + +
Sbjct: 21 GVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVH----LQIWDISGQDRYGV 76
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
V+Y+ H I+V D T ++ +W ++
Sbjct: 77 MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDL 110
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGKTS+ HN + T+G +K+ E T +++WD+ G + +
Sbjct: 21 GVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVH----LQIWDISGQDRYGV 76
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
V+Y+ H I+V D T ++ +W ++
Sbjct: 77 MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDL 110
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 281 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
T E+WD G + + ++Y+ I+V+D+TN++S + W+ E+ Q S N
Sbjct: 67 TIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPN 124
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGK++L N+ L T+G K+ EG + V++WD G R
Sbjct: 18 GVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISV-EGKAVK----VQIWDTAGMERFRC 72
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWL 424
+Y+ G +LV+D++ K+ ++++WL
Sbjct: 73 GASSYYRGALGALLVYDISKHKTYESVEQWL 103
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G R+ +Y+ ++LV+D+ NR S N + WL++I
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQI 101
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G R+ +Y+ ++LV+D+ NR S N + WL++I
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQI 101
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 87 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 134
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+++WD G +R +Y+ G IL++D+TN +S ++Q W +I
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYK-EGTQAQNTFFVELWDVGGSNGHR 328
GVGK+SL ++ + P V+ ++ +G + + + +WD G R
Sbjct: 21 GVGKSSL--MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVK----LAIWDTAGQERFR 74
Query: 329 NTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+Y+ G+I V+D+T+R S L W+ E+
Sbjct: 75 TLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEV 109
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
+++WD G R+ +Y+ G +LV+D+T R + +L WL + +SN
Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSN 111
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 278 NTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
N + +WD G R +Y+ G+I V+D+T+R S L W+ E+
Sbjct: 31 NRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEV 82
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +2
Query: 152 GVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNG 322
GVGKTS+ + AH +P+ + T+G S V + ++ +++WD G
Sbjct: 62 GVGKTSIIYRHRYGAHYRPVNA---TIGASF-VSFDVGADYRDREDVVRLQVWDTAGQER 117
Query: 323 HRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
R ++ + ++V+D+T+R + +++KWL ++
Sbjct: 118 FRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDL 154
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 460
V++WD+GG + D + + + LV+D+TN KS N WL+ + S+ T
Sbjct: 87 VQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSET 143
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
+ +WD G R+ +Y+ G +LV+D+T+R+S +L+ WL ++
Sbjct: 57 LHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL 104
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 36.7 bits (81), Expect = 0.019
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
G GKT+L N P T+G + K+ + +G + ++LWD G R
Sbjct: 16 GAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIR----LQLWDTAGQERFRQ 71
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 460
+ + +LV DL++ +L +W I++++ S+ T
Sbjct: 72 LAPAYIRSARVALLVIDLSDENCVEHLIRWKG-IIDKNKSDFT 113
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 36.3 bits (80), Expect = 0.025
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
GVGKTSL + + + T+G + + T +++WD G ++
Sbjct: 19 GVGKTSLMNQYVNRRFSNQYKATIGADFLTR-----DVNIDDRTVTLQIWDTAGQERFQS 73
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDS 448
FY+ +L D+TN S +L W E L Q S
Sbjct: 74 LGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQAS 112
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 35.1 bits (77), Expect = 0.058
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 281 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 460
TF + ++DVGG G R +Y HGII V D + ++ E L+ +SNP
Sbjct: 68 TFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTE----SIEALHSLTSNPH 123
Query: 461 LQ 466
+Q
Sbjct: 124 VQ 125
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 35.1 bits (77), Expect = 0.058
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 281 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 460
TF + ++DVGG G R +Y HGII V D + ++ E L+ +SNP
Sbjct: 68 TFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTE----SIEALHSLTSNPH 123
Query: 461 LQ 466
+Q
Sbjct: 124 VQ 125
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDV-FYQPTHGIILVHDLTNRKSQVNLQKWLAE 430
V+LWD G +R + +Y+ + ++ V+D+T R+S +L W+ E
Sbjct: 151 VQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 198
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 34.7 bits (76), Expect = 0.077
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 281 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 442
T ++LWD G R+ + + + ++V+D+TN S KW+ ++ N+
Sbjct: 59 TIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNE 112
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 260 EGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 439
E + +N F +WDVGG + R ++Q T G+I V D +++ ++ L ++LN
Sbjct: 54 ETVEYKNISFT-VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLN 112
Query: 440 QD 445
+D
Sbjct: 113 ED 114
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 260 EGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 439
E + +N F +WDVGG + R ++Q T G+I V D +++ ++ L ++LN
Sbjct: 54 ETVEYKNISFT-VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLN 112
Query: 440 QD 445
+D
Sbjct: 113 ED 114
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 281 TFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 454
T ++LWD G R+ + + + ++V+D+TN S KW+ ++ + S+
Sbjct: 58 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSD 115
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 263 GTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQ 442
GT+ ++LWDV G + + + G+ILV + K +LQ+W E + +
Sbjct: 106 GTRRLEDSEIQLWDVSGDKKYEDCWPAIKENAEGVILVVNPEEHKGS-DLQQWFYEFVEK 164
Query: 443 DS 448
++
Sbjct: 165 EN 166
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 284 FFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 445
F + LWDVGG R+ +++ T +I V D ++R+ + + L ++L ++
Sbjct: 60 FQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEE 113
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 433
++LWD G R+ +++ G ILV+D+ +S + ++ W+ I
Sbjct: 512 LQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETI 559
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 260 EGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 439
E + +N F +WDVGG + R ++Q T G+I V D +R+ ++ L +L
Sbjct: 54 ETVEYKNISFT-VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLA 112
Query: 440 QD 445
+D
Sbjct: 113 ED 114
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 368 ILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 472
IL +DL + S +++ W+ + +D NPT H+
Sbjct: 185 ILGYDLNSHVSSSDMEHWMKHSIKEDYGNPTAPHI 219
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 299 WDVGGSNGHRNTRDV-FYQPTHGIILVHDLTNRKSQVNLQKWLAE 430
WD G +R + +Y+ + ++ V+D+T R+S +L W+ E
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 45
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical protein
C04A11.3 protein.
Length = 1228
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 508 VIGTKYDAAEEKQRKNQYRRLASSIAEQ---CGADEIFVTCHQARSLAPGSTNSVKLTRF 678
V+G K D + KQ+ + RRL A Q A+ I + QAR TN + +
Sbjct: 822 VLGVKDDKVQRKQQLHDLRRLQRDEARQKQELQAEGIKLVEEQARKFTSEQTNLTRTSEL 881
Query: 679 FDKVIERR 702
+ERR
Sbjct: 882 EMDAMERR 889
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/98 (27%), Positives = 46/98 (46%)
Frame = +2
Query: 152 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRN 331
G GKT++ + + + + + T+G +VE +K N F ++WD+GG R
Sbjct: 26 GAGKTTILYRLQVGEVVTTIP-TIGFNVEQVEYK--------NLKF-QVWDLGGQTSIRP 75
Query: 332 TRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 445
+Y T II V D +R ++ LA +L +D
Sbjct: 76 YWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQED 113
>Z79753-1|CAB02086.1| 249|Caenorhabditis elegans Hypothetical
protein F20G2.1 protein.
Length = 249
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 515 PITVWNLRTVPDRRLHAVKLDSNCPDSI 432
P L ++ D R+H ++LD +C DSI
Sbjct: 39 PSNATELNSIKDTRVHILQLDIDCDDSI 66
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 290 VELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 445
+ +WD+GG R +Y+ +I V D ++K + L E+L+++
Sbjct: 64 LNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEE 115
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 296 LWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKW 421
+WD G RD +Y I++ D+T R + N+ W
Sbjct: 62 VWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNW 103
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 260 EGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHD 382
E +N FV +WD+GG R + +Y T +I+V D
Sbjct: 54 EEVSYRNLDFV-IWDIGGQESLRKSWSTYYVQTDVVIVVID 93
>U39471-1|AAA80132.4| 461|Caenorhabditis elegans Intestinal acid
phosphatase protein4 protein.
Length = 461
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -2
Query: 497 LRTVPDRRLHAVKLDSNCP--DSIFQRATSEDSL-DFFCSS 384
+ T+PD H + +D+ CP D+I+ A + D++ ++F SS
Sbjct: 165 IHTIPDAEDHLLSVDNYCPLQDTIWNLAKTTDTVSNYFNSS 205
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/94 (27%), Positives = 42/94 (44%)
Frame = +2
Query: 158 GKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRNTR 337
GKT++ + + + + + TVG +VE +K N F +WDVGG + R
Sbjct: 25 GKTTILYKLKLGQSVTTIP-TVGFNVETVTYK--------NIKF-NVWDVGGQDKIRPLW 74
Query: 338 DVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILN 439
+Y T +I V D +R + L I+N
Sbjct: 75 RHYYTGTQALIFVMDAADRDRVDEARMELHRIIN 108
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 305 VGGSNGHRNTRDVFYQPTHGII-LVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDV 478
V +N + T + + +G + V D RKS VN+ +W ++NQ + L V +
Sbjct: 96 VSAANFDKKTVEQYKNELNGQLQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSL 154
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 321 PFEPPTSQSSTKNVFWACVPSLYLCNLTSTEQPTVHP 211
PF+ PT+++ T + FW PS + ST PT+ P
Sbjct: 728 PFDLPTAETFTLSNFWLTTPSSAPSIVPST--PTISP 762
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,940,892
Number of Sequences: 27780
Number of extensions: 420181
Number of successful extensions: 1183
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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