SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2b02
         (731 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF275803-1|AAG23817.1|  205|Homo sapiens PNAS-107 protein.            133   7e-31
Z99127-8|CAI18938.1|  228|Homo sapiens calcyclin binding protein...   129   9e-30
BC078151-1|AAH78151.1|  228|Homo sapiens calcyclin binding prote...   129   9e-30
BC067823-1|AAH67823.1|  228|Homo sapiens calcyclin binding prote...   129   9e-30
BC022352-1|AAH22352.1|  228|Homo sapiens calcyclin binding prote...   129   9e-30
BC005975-1|AAH05975.1|  228|Homo sapiens calcyclin binding prote...   129   9e-30
AY423723-1|AAS00486.1|  228|Homo sapiens growth-inhibiting gene ...   129   9e-30
AL035305-1|CAA22910.1|  228|Homo sapiens hypothetical protein pr...   129   9e-30
AF314752-1|AAG34170.1|  228|Homo sapiens calcyclin binding prote...   129   9e-30
AF057356-1|AAC21458.1|  228|Homo sapiens calcyclin binding prote...   129   9e-30
Z99127-9|CAI18939.1|  185|Homo sapiens calcyclin binding protein...   114   3e-25
U83246-1|AAC15920.1|  537|Homo sapiens copine I protein.               30   9.8  
CR456790-1|CAG33071.1|  537|Homo sapiens CPNE1 protein.                30   9.8  
BC001142-1|AAH01142.1|  537|Homo sapiens copine I protein.             30   9.8  
AL109827-17|CAI20127.1|  209|Homo sapiens copine I protein.            30   9.8  
AL109827-16|CAI20128.1|  202|Homo sapiens copine I protein.            30   9.8  
AL109827-15|CAI20126.1|  231|Homo sapiens copine I protein.            30   9.8  
AL109827-13|CAI20123.1|  304|Homo sapiens copine I protein.            30   9.8  
AL109827-10|CAO72111.1|  481|Homo sapiens copine I protein.            30   9.8  
AL109827-9|CAB87610.2|  537|Homo sapiens copine I protein.             30   9.8  

>AF275803-1|AAG23817.1|  205|Homo sapiens PNAS-107 protein.
          Length = 205

 Score =  133 bits (321), Expect = 7e-31
 Identities = 68/184 (36%), Positives = 105/184 (57%), Gaps = 1/184 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKVQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQRNNRLKP 717
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ ++++     P
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKKKPSYDP 183

Query: 718 AETD 729
            ETD
Sbjct: 184 -ETD 186


>Z99127-8|CAI18938.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>BC078151-1|AAH78151.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>BC067823-1|AAH67823.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>BC022352-1|AAH22352.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>BC005975-1|AAH05975.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>AY423723-1|AAS00486.1|  228|Homo sapiens growth-inhibiting gene 5
           protein protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>AL035305-1|CAA22910.1|  228|Homo sapiens hypothetical protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>AF314752-1|AAG34170.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>AF057356-1|AAC21458.1|  228|Homo sapiens calcyclin binding protein
           protein.
          Length = 228

 Score =  129 bits (312), Expect = 9e-30
 Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +1

Query: 181 QEIRSDIEEINDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEV-SPIPTTST 357
           +E++ D+EE+  LL++A RK+V+D L+ E                    E+       + 
Sbjct: 4   EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAV 63

Query: 358 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 537
            AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K
Sbjct: 64  VAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGK 123

Query: 538 DYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
            Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 124 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 176


>Z99127-9|CAI18939.1|  185|Homo sapiens calcyclin binding protein
           protein.
          Length = 185

 Score =  114 bits (275), Expect = 3e-25
 Identities = 50/112 (44%), Positives = 74/112 (66%)
 Frame = +1

Query: 361 APVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENKD 540
           AP+   Y VK++ YGWDQSDKFVK+++ L  VH +P E V    T++S +L V NL  K 
Sbjct: 22  APITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKS 81

Query: 541 YLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQ 696
           Y +++N LL+PI+V  S  K KTD V+I   K   NT W ++T++EK+ +++
Sbjct: 82  YSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEK 133


>U83246-1|AAC15920.1|  537|Homo sapiens copine I protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>CR456790-1|CAG33071.1|  537|Homo sapiens CPNE1 protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>BC001142-1|AAH01142.1|  537|Homo sapiens copine I protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>AL109827-17|CAI20127.1|  209|Homo sapiens copine I protein.
          Length = 209

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>AL109827-16|CAI20128.1|  202|Homo sapiens copine I protein.
          Length = 202

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>AL109827-15|CAI20126.1|  231|Homo sapiens copine I protein.
          Length = 231

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>AL109827-13|CAI20123.1|  304|Homo sapiens copine I protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>AL109827-10|CAO72111.1|  481|Homo sapiens copine I protein.
          Length = 481

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


>AL109827-9|CAB87610.2|  537|Homo sapiens copine I protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 502 SMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMT 669
           +ME+   NL+ KD+L   +  LE     D  W       VI   K+N N TW   +
Sbjct: 141 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVYRSEVI---KNNLNPTWKRFS 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,621,914
Number of Sequences: 237096
Number of extensions: 1764304
Number of successful extensions: 3999
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3989
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -