Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2b02
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   0.42 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.73 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   9.0  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 46  LTVLI*IIYVTGLQNS*LTCLFVISKDLHSIQTN 147
           LT++  II+VTG+  +  TC  +I        TN
Sbjct: 43  LTIIYMIIFVTGIFGNITTCTVIIKNPAMQTATN 76


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 46  LTVLI*IIYVTGLQNS*LTCLFVI-SKDLHS 135
           +TV+  +I+VTGL  +  TC+ +  +K +H+
Sbjct: 56  ITVIYAVIFVTGLVGNVSTCVVIARNKSMHT 86


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 547 ASNLYFPDCPHAAPLIYLSIYNI 479
           A  LY+P  P  +  I + ++NI
Sbjct: 267 ALQLYYPHVPEYSSSIIMELHNI 289


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 547 ASNLYFPDCPHAAPLIYLSIYNI 479
           A  LY+P  P  +  I + ++NI
Sbjct: 282 ALQLYYPHVPEYSSSIIMELHNI 304


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 478 PVPLVVYEHSLVQQIP*QIYPTGPNHI 398
           P+   +Y  +L+Q  P   YP+  +HI
Sbjct: 423 PMEYRLYNPALIQSQPSPQYPSTSSHI 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,652
Number of Sequences: 438
Number of extensions: 4110
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)