Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2b01
         (382 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.23 
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   2.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   8.7  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -2

Query: 123 LLFITINTIPLLVVRHVTSVVIIYLSKYLRVVCIK 19
           +L + +N IPL  +   T++ ++Y + +L+ + IK
Sbjct: 612 VLLVDVNHIPLQPMFLTTTIAVVYFTVFLQGITIK 646


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 153 HNYRLPLRVNLLFITINTIPLLVVRHVT 70
           H    PL VN  ++    + LLV  HVT
Sbjct: 695 HPSSRPLLVNFAYLLTKKLSLLVCGHVT 722


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 337 YMSLLLDLTSKSIKTHIYHRQIKC 266
           Y S  L L S+ +KTH   R  KC
Sbjct: 134 YTSNKLFLLSRHLKTHSEDRPHKC 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,979
Number of Sequences: 2352
Number of extensions: 8343
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)