Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2a22
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 64  KIV*NSQKRNNKITFKSLTLN 2
           K+V N+QK  +K   K+L LN
Sbjct: 266 KVVKNAQKLRHKFDLKTLVLN 286


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 233 FYSLYSSFILPVCGYHSGSLF 171
           F+S+ ++ +L +CG  S  LF
Sbjct: 412 FFSIDNALLLSICGASSSYLF 432


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 614 LSHRDHSSLTTRIVCLPHVSVFS 546
           +S  DHS +  ++  +PH S F+
Sbjct: 64  VSRADHSPVFGKVEPVPHTSSFN 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,885
Number of Sequences: 336
Number of extensions: 4047
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)