Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2a14
(667 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 227 1e-58
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 227 2e-58
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 224 2e-57
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 223 4e-57
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 203 3e-51
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 202 6e-51
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 202 8e-51
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 195 9e-49
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 193 3e-48
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 192 9e-48
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 189 5e-47
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 182 5e-45
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 175 6e-43
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 114 6e-42
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 171 1e-41
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 167 3e-40
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 165 6e-40
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 165 6e-40
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 161 2e-38
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 155 1e-36
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 153 4e-36
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 143 4e-33
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 140 3e-32
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 139 6e-32
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 132 6e-30
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 132 7e-30
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 131 1e-29
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 131 1e-29
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 131 2e-29
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 130 4e-29
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 127 2e-28
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 127 2e-28
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 127 3e-28
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 126 5e-28
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 126 5e-28
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 124 1e-27
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 123 3e-27
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 122 8e-27
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 122 1e-26
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 122 1e-26
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 121 1e-26
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 120 3e-26
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 119 7e-26
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 117 2e-25
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 116 4e-25
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 116 4e-25
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 116 5e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 116 5e-25
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 116 5e-25
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 114 2e-24
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 113 4e-24
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 113 5e-24
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 112 6e-24
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 111 1e-23
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 109 4e-23
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 109 6e-23
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 109 6e-23
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 107 2e-22
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 105 7e-22
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 105 1e-21
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 105 1e-21
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 99 5e-20
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 100 6e-20
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 99 8e-20
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 98 2e-19
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 98 2e-19
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 95 1e-18
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 1e-18
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 95 2e-18
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 95 2e-18
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 93 4e-18
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 93 5e-18
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 93 7e-18
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 90 5e-17
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 89 1e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 85 1e-15
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 83 8e-15
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 83 8e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 79 1e-13
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 77 3e-13
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 76 9e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 8e-11
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 68 2e-10
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 68 2e-10
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 67 3e-10
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 65 1e-09
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 59 8e-08
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 58 1e-07
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 6e-07
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 55 1e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 54 4e-06
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 52 2e-05
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 51 3e-05
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 50 5e-05
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 49 1e-04
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 49 1e-04
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 49 1e-04
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 46 6e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 8e-04
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 46 8e-04
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 45 0.001
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 44 0.003
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 44 0.003
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 44 0.003
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 44 0.003
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 43 0.006
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.018
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 41 0.023
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.031
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 40 0.041
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 40 0.054
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.071
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 39 0.094
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 39 0.094
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 39 0.12
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 38 0.16
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.38
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 1.2
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 35 2.0
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 8.2
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 227 bits (556), Expect = 1e-58
Identities = 111/217 (51%), Positives = 138/217 (63%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTV
Sbjct: 275 HMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTV 334
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS +P+F GL +N Y L
Sbjct: 335 GGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFL 394
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXX 542
KI F+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 395 KIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPDMYLNWNLFSSFGSLISLIGVFLFIF 454
Query: 543 XXXXXXXNQRINLFSLNLPSSIE*YQNLPPAEHSYNE 653
QR +F + SSIE + PP +HSY+E
Sbjct: 455 IIWESLIMQRFVIFVKFINSSIEWFHLYPPLDHSYDE 491
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 227 bits (555), Expect = 2e-58
Identities = 104/155 (67%), Positives = 124/155 (80%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTV
Sbjct: 291 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTV 350
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS
Sbjct: 351 GGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWT 410
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 411 KIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 224 bits (547), Expect = 2e-57
Identities = 103/155 (66%), Positives = 123/155 (79%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTV
Sbjct: 291 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTV 350
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LANSSIDI LHDTYYVVAHFHYVLS + +PLFTG +L+
Sbjct: 351 GGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWT 410
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 411 KIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 223 bits (544), Expect = 4e-57
Identities = 99/155 (63%), Positives = 125/155 (80%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTV
Sbjct: 291 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTV 350
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 351 GGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYA 410
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 411 KIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 203 bits (495), Expect = 3e-51
Identities = 96/151 (63%), Positives = 114/151 (75%)
Frame = +3
Query: 15 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 194
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 195 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 374
G++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 375 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 416 GVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 202 bits (493), Expect = 6e-51
Identities = 93/155 (60%), Positives = 115/155 (74%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+
Sbjct: 291 HMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTI 350
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS P GL N
Sbjct: 351 GGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYS 410
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
K F+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 411 KAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 202 bits (492), Expect = 8e-51
Identities = 96/136 (70%), Positives = 110/136 (80%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTV
Sbjct: 204 HMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTV 263
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV+LANSSIDI LHDTYYVVAHFHYVLS +PLFTG++LN++ L
Sbjct: 264 GGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFL 323
Query: 363 KIQFFTIFIGVNITFF 410
KIQF +FIGVN+TFF
Sbjct: 324 KIQFIIMFIGVNLTFF 339
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 195 bits (475), Expect = 9e-49
Identities = 90/155 (58%), Positives = 115/155 (74%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+
Sbjct: 317 HMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTI 376
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+GV+LAN+S +I HDTYYVVAHFHYVLS P GLS ++
Sbjct: 377 GGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKAS 436
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 437 KIHFWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 193 bits (471), Expect = 3e-48
Identities = 92/157 (58%), Positives = 115/157 (73%), Gaps = 2/157 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLF 176
H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLF
Sbjct: 256 HMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLF 315
Query: 177 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSY 356
T+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS + TG +
Sbjct: 316 TIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDI 375
Query: 357 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 376 YGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 192 bits (467), Expect = 9e-48
Identities = 90/155 (58%), Positives = 113/155 (72%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+
Sbjct: 298 HMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTI 357
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + TGL +
Sbjct: 358 GGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLG 417
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+I F++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 418 QIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 189 bits (461), Expect = 5e-47
Identities = 89/155 (57%), Positives = 110/155 (70%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+
Sbjct: 293 HMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTI 352
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LANS +DI LHDTYYVVAHFHYVLS G + +
Sbjct: 353 GGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG 412
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+I F+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 413 QIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 182 bits (444), Expect = 5e-45
Identities = 81/155 (52%), Positives = 109/155 (70%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTV
Sbjct: 333 HMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTV 392
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV+LAN +D LHDTYYVVAHFHYVLS +P +G N ++
Sbjct: 393 GGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLG 452
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
++ F+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 453 QLHFWVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 175 bits (427), Expect = 6e-43
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFL 173
H+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V L
Sbjct: 294 HMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLL 353
Query: 174 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 353
FT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS +P +TG+
Sbjct: 354 FTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRK 413
Query: 354 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
++ F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 414 DLVLTHFMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 114 bits (274), Expect(2) = 6e-42
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 14/99 (14%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT+
Sbjct: 350 HMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTI 409
Query: 183 GGL--------------TGVILANSSIDITLHDTYYVVA 257
GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 410 GGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 79.8 bits (188), Expect(2) = 6e-42
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = +3
Query: 237 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 416
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 417 HFLGLAGIPRRYSDYPD 467
HFLGL G+PRR SDYPD
Sbjct: 536 HFLGLQGMPRRISDYPD 552
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 171 bits (416), Expect = 1e-41
Identities = 79/122 (64%), Positives = 93/122 (76%)
Frame = +3
Query: 102 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 281
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSM 384
Query: 282 XXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+ +PLFTG +LNS K F +F GVN+TFFPQHFLGLAG+PRRYSDY
Sbjct: 385 GAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDY 444
Query: 462 PD 467
PD
Sbjct: 445 PD 446
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 167 bits (405), Expect = 3e-40
Identities = 80/156 (51%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFT 179
H++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT
Sbjct: 294 HMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFT 352
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYI 359
+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TGLS + +
Sbjct: 353 IGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESL 412
Query: 360 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+ F+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 413 GQAHFWMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 165 bits (402), Expect = 6e-40
Identities = 76/155 (49%), Positives = 100/155 (64%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTV
Sbjct: 301 HMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTV 360
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+S +S ++
Sbjct: 361 GGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMM 420
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
F F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 421 MAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 165 bits (402), Expect = 6e-40
Identities = 77/129 (59%), Positives = 99/129 (76%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTV
Sbjct: 56 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTV 115
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG+ILANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L++
Sbjct: 116 GGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWT 175
Query: 363 KIQFFTIFI 389
KI F +F+
Sbjct: 176 KIHFGVMFM 184
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 161 bits (390), Expect = 2e-38
Identities = 75/155 (48%), Positives = 101/155 (65%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+
Sbjct: 396 HMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTL 455
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG TG+IL+ + +D HDTYYVVAHFHYV+S +G +
Sbjct: 456 GGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAG 515
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
++ F+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 516 QVHFWVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 155 bits (375), Expect = 1e-36
Identities = 77/138 (55%), Positives = 91/138 (65%)
Frame = +3
Query: 21 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 200
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 201 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 380
+LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 381 IFIGVNITFFPQHFLGLA 434
FP FL ++
Sbjct: 121 NIFSCKFNIFPPTFLSIS 138
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +2
Query: 293 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 472
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS LI
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 473 YFMK 484
+K
Sbjct: 152 LLLK 155
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 153 bits (371), Expect = 4e-36
Identities = 69/116 (59%), Positives = 90/116 (77%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+
Sbjct: 268 HMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTL 327
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 350
GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 328 GGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 143 bits (346), Expect = 4e-33
Identities = 70/154 (45%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFT 179
H+F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFT
Sbjct: 381 HMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFT 440
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYI 359
VGG+TGV L+ S++DI HDT++VVAHFHYVLS +P G SLN Y+
Sbjct: 441 VGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYL 500
Query: 360 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
L+ + +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 501 LQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 140 bits (339), Expect = 3e-32
Identities = 70/157 (44%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFT 179
H++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ FT
Sbjct: 296 HMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFT 355
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSY 356
GG TGVIL N++ID+ LHDTYYV+AHFH+VLS F G +L +
Sbjct: 356 FGGTTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENS 415
Query: 357 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 416 IVILWSMLFFVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 139 bits (336), Expect = 6e-32
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Frame = +3
Query: 6 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 179
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSY 356
GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F G +L +
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENT 119
Query: 357 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 120 IIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 132 bits (320), Expect = 6e-30
Identities = 64/155 (41%), Positives = 95/155 (61%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +
Sbjct: 312 HMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFII 371
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FTG ++ +
Sbjct: 372 GGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERLG 431
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
K+ F+ F G N+TFFP H LGL G+PRR Y D
Sbjct: 432 KVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 132 bits (319), Expect = 7e-30
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 3/158 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFL 173
H+FT GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+
Sbjct: 316 HMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFI 374
Query: 174 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 353
FTVGG+TGV++A ID +HDTY+VVAHFHYVL P F+ L+
Sbjct: 375 FTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSE 434
Query: 354 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+ + F+ +FIG N+TFFP H GL G+PRR YPD
Sbjct: 435 RLGRWVFWLMFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 131 bits (317), Expect = 1e-29
Identities = 65/155 (41%), Positives = 91/155 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +
Sbjct: 309 HMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVI 368
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++ A ID L DTY+VVAHFHYVL +P TG LN I
Sbjct: 369 GGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIG 428
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+QF+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 429 ILQFWLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 131 bits (317), Expect = 1e-29
Identities = 61/155 (39%), Positives = 95/155 (61%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F +
Sbjct: 48 HMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLL 106
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TG++LANS +D+ +HD+YYVVAHFHYVLS + + L +G +++L
Sbjct: 107 GGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLL 166
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
++Q + G F+ H G G+PRR D PD
Sbjct: 167 RVQVVLLVWGTTCIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 131 bits (316), Expect = 2e-29
Identities = 66/153 (43%), Positives = 91/153 (59%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +
Sbjct: 301 HMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMI 360
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV++A+ DI +HDTY+VV HFHYVL + +P TG +N +
Sbjct: 361 GGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLG 420
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
++ F FIG+N+TF P H LGL G+ RR + Y
Sbjct: 421 RLHFILTFIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 130 bits (313), Expect = 4e-29
Identities = 66/149 (44%), Positives = 88/149 (59%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +
Sbjct: 299 HMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVL 358
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV+LA ++ D HDTY+VVAHFHYV+ +P G L+ +
Sbjct: 359 GGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMG 418
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRR 449
KI F FIG ++TFF QHF+GL G+PRR
Sbjct: 419 KISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 127 bits (307), Expect = 2e-28
Identities = 61/152 (40%), Positives = 89/152 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F V
Sbjct: 342 HMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIV 401
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+G+ +A +D+ HDTY++VAHFHY+L +P G +N +
Sbjct: 402 GGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLG 461
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 458
K F FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 462 KTHFVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 127 bits (307), Expect = 2e-28
Identities = 64/156 (41%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +
Sbjct: 293 HMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLI 352
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
G +TG+ L+N IDI LHDTY+VV HFHYVLS + L L + Y+
Sbjct: 353 GAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLF 410
Query: 363 KIQFF--TIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
+ +F T+FIG N+ FFP H LG+ PRR SDYP
Sbjct: 411 WMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 127 bits (306), Expect = 3e-28
Identities = 63/153 (41%), Positives = 91/153 (59%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +
Sbjct: 308 HMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFII 367
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG++GV LA+ I++ D+YYVVAH HYVL +P TG L+ +
Sbjct: 368 GGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLG 427
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
K QF+ + I N+TFFP H G AG+PRR Y
Sbjct: 428 KWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 126 bits (304), Expect = 5e-28
Identities = 64/154 (41%), Positives = 90/154 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +
Sbjct: 246 HMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLI 305
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG+ L +ID+ + D+ +VV HFHYVL + +PL TG +
Sbjct: 306 GGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLG 365
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
K+ F+ IF G NI +F Q G+ G PRRY DYP
Sbjct: 366 KLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 126 bits (304), Expect = 5e-28
Identities = 63/153 (41%), Positives = 90/153 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +
Sbjct: 330 HFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVI 389
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV+LA ++ D H+TY++V+HFHYVL YP G LN I
Sbjct: 390 GGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIG 449
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 450 KWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 124 bits (300), Expect = 1e-27
Identities = 62/153 (40%), Positives = 90/153 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F +
Sbjct: 306 HMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVI 365
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV++A+ D +HDTY+VVAHFHYVL +P TG ++ +
Sbjct: 366 GGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLG 425
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+ F IF G N+TFFP H LGL G+PRR Y
Sbjct: 426 RWSFGLIFSGFNLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 123 bits (297), Expect = 3e-27
Identities = 57/150 (38%), Positives = 88/150 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F
Sbjct: 352 HMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFIS 411
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TG+IL N+++DI LHDTYYVVAHFH V+ + +P G ++ +
Sbjct: 412 GGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLG 471
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRY 452
I F+ F+G + FFP H++G+AG PRRY
Sbjct: 472 YIHFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 122 bits (294), Expect = 8e-27
Identities = 60/153 (39%), Positives = 85/153 (55%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +
Sbjct: 375 HMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFIL 434
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV LA+ +D+ LH TYYVV HFHY++ +PL+TG +
Sbjct: 435 GGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLG 494
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
K+ F+ IG NITFF LG G+PRRY+ Y
Sbjct: 495 KMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 122 bits (293), Expect = 1e-26
Identities = 68/164 (41%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFT 179
H+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT
Sbjct: 4 HMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFT 63
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN--- 350
+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS G +LN
Sbjct: 64 LGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNLFH 123
Query: 351 -----SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
S L I F + + F P H LG +PRR DYPD
Sbjct: 124 VNTGSSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 122 bits (293), Expect = 1e-26
Identities = 59/155 (38%), Positives = 86/155 (55%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+ F
Sbjct: 330 HMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVN 389
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG+ L N +D+ L DT +VVAHFH V+ + YP TG LN +
Sbjct: 390 GGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLG 449
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
K F+ F+G + FFP H+LGL G+PRRY + D
Sbjct: 450 KFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 121 bits (292), Expect = 1e-26
Identities = 58/152 (38%), Positives = 87/152 (57%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F +
Sbjct: 339 HMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVI 398
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+G+ +A + +DI +HDTY++VAHFHYVL +P G +N
Sbjct: 399 GGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAG 458
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 458
KI F FI +N TFF H LG+ G PRR +D
Sbjct: 459 KIHFALTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 120 bits (289), Expect = 3e-26
Identities = 63/153 (41%), Positives = 87/153 (56%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+
Sbjct: 310 HMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTI 369
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGL+G + A + D HDTY+VVAHFHYVL + +P G L+ +
Sbjct: 370 GGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLG 429
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+ F IF G + FP H LGL G+PRR Y
Sbjct: 430 RWSFALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 119 bits (286), Expect = 7e-26
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFT 179
H++T G+DIDTR+YFT+AT+IIAVPTGIKIF L+++ + + N ++ F+ F
Sbjct: 274 HMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFA 333
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYI 359
+GG +G+IL+N+S+D LHDTYYVVAHFH V++ Y L + LSL +
Sbjct: 334 IGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YYLSSYLSLPFSL 390
Query: 360 LKIQFFTIFIGVNITFFP-QHFLGLAGIPRRYSDYPD 467
+ ++F+ + + F QHF G + +PRRY + D
Sbjct: 391 PLSGYASLFVFSSFSVFALQHFQGYSAMPRRYFMHSD 427
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 117 bits (282), Expect = 2e-25
Identities = 58/153 (37%), Positives = 87/153 (56%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++ G+ R T++I++P G+ + + T++G I++ +L LGF+FLF +
Sbjct: 291 HLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLI 350
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV LA S+ + L +TYYVV HFHYV++ +P TG N I
Sbjct: 351 GGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIG 410
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
K F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 411 KWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 116 bits (280), Expect = 4e-25
Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFT 179
H+FTVG+DID+R+YF+ AT II++PT +K+F + T G N + F+ F
Sbjct: 300 HMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFC 359
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYI 359
GG TG++L++ S+DI LHDTY+VV HFH VLS P+ S+
Sbjct: 360 FGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFESF 419
Query: 360 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 420 SFYHTFLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 116 bits (280), Expect = 4e-25
Identities = 55/153 (35%), Positives = 85/153 (55%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +
Sbjct: 344 HMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFII 403
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ TG +
Sbjct: 404 GGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLA 463
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
F+T +G N TF +LG G+PRRY+ Y
Sbjct: 464 HAHFWTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 116 bits (279), Expect = 5e-25
Identities = 58/154 (37%), Positives = 86/154 (55%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F GI A+F +A+++I++P+ + +F +ATI + + L GFV +F V
Sbjct: 326 HMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVV 385
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG++GV+ A +D L DTY+VVAH HYVL +P FTG +N
Sbjct: 386 GGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFG 445
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 446 KLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 116 bits (279), Expect = 5e-25
Identities = 51/85 (60%), Positives = 69/85 (81%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+
Sbjct: 308 HMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTI 367
Query: 183 GGLTGVILANSSIDITLHDTYYVVA 257
GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 368 GGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 116 bits (279), Expect = 5e-25
Identities = 57/153 (37%), Positives = 86/153 (56%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F F +
Sbjct: 300 HMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLL 359
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV+L+ + +D HD+Y+VVAHFH VL +P TG + +
Sbjct: 360 GGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLG 419
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 420 RLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 114 bits (274), Expect = 2e-24
Identities = 56/154 (36%), Positives = 90/154 (58%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +
Sbjct: 332 HMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVL 391
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV++A ++ HD+Y+VVAH HYVL P FTG ++ +
Sbjct: 392 GGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLG 451
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
K F+ +F G N+ FF H G+ G+PRR + YP
Sbjct: 452 KWVFWLMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 113 bits (272), Expect = 4e-24
Identities = 55/154 (35%), Positives = 88/154 (57%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT
Sbjct: 332 HMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTA 391
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV++A + D +HDTY++VAH HY L YP+ T +L+ +
Sbjct: 392 GGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLG 451
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
+ F+ +F G N+TF P H GL G+PRR YP
Sbjct: 452 RWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 113 bits (271), Expect = 5e-24
Identities = 51/82 (62%), Positives = 66/82 (80%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+
Sbjct: 290 HMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTI 349
Query: 183 GGLTGVILANSSIDITLHDTYY 248
GGLTGVILAN+S+D+ LHD Y
Sbjct: 350 GGLTGVILANASLDVALHDLKY 371
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 112 bits (270), Expect = 6e-24
Identities = 60/154 (38%), Positives = 83/154 (53%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F +
Sbjct: 308 HMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLI 367
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV L D + +YYVVAHFH V+ +P TG L+ +
Sbjct: 368 GGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVG 427
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 428 LAHFWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 111 bits (267), Expect = 1e-23
Identities = 55/155 (35%), Positives = 88/155 (56%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F
Sbjct: 315 HMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLF 372
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LA+ +D L D+Y+++AHFHY L +P TG ++ +
Sbjct: 373 GGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLG 432
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F+ F+G + TF QH++G G+PRRY+DY D
Sbjct: 433 KIHFWLTFVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 109 bits (263), Expect = 4e-23
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVF 170
H+FT GI + ++F +A+ +A+P+G+++F +AT + I L LGF+F
Sbjct: 375 HMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLF 434
Query: 171 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 350
+F +GGLTGV++A D HD+Y++VAH HYVL P + +L+
Sbjct: 435 IFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALS 494
Query: 351 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+ + F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 495 ERLGRWVFGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 109 bits (262), Expect = 6e-23
Identities = 56/155 (36%), Positives = 83/155 (53%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G++ + F+ T+II +P + L +++G+++ N L LGF+ +F
Sbjct: 338 HMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVS 397
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG++G LA SIDI LH TY+VV HFH V+ +P TG +N +
Sbjct: 398 GGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLG 457
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F+ FIG F P H+LG+ G RRYS + D
Sbjct: 458 KIHFWGTFIGAYCIFMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 109 bits (262), Expect = 6e-23
Identities = 56/153 (36%), Positives = 82/153 (53%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G R F T++IA+PTG+K+F L T+ + N +L +G + F
Sbjct: 316 HMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIF 375
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FTG +
Sbjct: 376 AGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLG 435
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
K+ F FIG + + P H+ GL G+PRR + Y
Sbjct: 436 KVHFVLTFIGATLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 107 bits (257), Expect = 2e-22
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTV
Sbjct: 291 HMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTV 350
Query: 183 GGLTGVILANSSIDITLHD 239
GGLTGV+LAN+S+D+ HD
Sbjct: 351 GGLTGVVLANASLDVAFHD 369
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 105 bits (253), Expect = 7e-22
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++
Sbjct: 335 HFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSI 394
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV+LA D LH++ +++AHFH + +P G LN +
Sbjct: 395 GGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLG 454
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 464
K F+ IG F P + LG G+ RR ++D P
Sbjct: 455 KASFWFWQIGFMFAFMPLYVLGFLGMTRRLNHTDNP 490
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 105 bits (252), Expect = 1e-21
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Frame = +3
Query: 42 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 218
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 219 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y-PLFTGLSLNSYILKIQFFTIFIGV 395
ID+ LHDT YVV HFH+VLS L G+ L++ + + I V
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISV 428
Query: 396 NITFFPQHFLGLAGIPRRYSDYPD 467
+TF P HF G + +PRR DYPD
Sbjct: 429 LLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 105 bits (251), Expect = 1e-21
Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT+G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++
Sbjct: 334 HFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSI 393
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV+LA D LH++ +V+AHFH V+ +P G +LN
Sbjct: 394 GGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWG 453
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 464
K F+ G + F P + LG G+ RR +SD P
Sbjct: 454 KAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSDNP 489
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 99 bits (238), Expect = 5e-20
Identities = 51/155 (32%), Positives = 75/155 (48%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 309 HMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVF 368
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TG+ LA S+D+ HDTY++VAHFH+++ +P G L
Sbjct: 369 GGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGWG 428
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+ I +G N TF PQ LG G+PRRY YP+
Sbjct: 429 LVAAVMIILGFNFTFIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 99.5 bits (237), Expect = 6e-20
Identities = 50/155 (32%), Positives = 76/155 (49%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 316 HMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVF 375
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TG+ L S+D+ HDTY+VVAHFH+++ +P G + +
Sbjct: 376 GGMTGIALGTVSLDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGWG 435
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+ I +G N TF PQ LG G+PRRY +YP+
Sbjct: 436 LVAAALIILGFNATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 99.1 bits (236), Expect = 8e-20
Identities = 51/154 (33%), Positives = 82/154 (53%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F V
Sbjct: 300 HMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIV 359
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV ++D+ LHDTY+V+ HFHY+++ +P TG + +
Sbjct: 360 GGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLTGRWYDERLA 418
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
+I + I +G T+ G+ G PRRY+ P
Sbjct: 419 RISWALITVGGFATYTLMSAAGVLGSPRRYAAAP 452
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/153 (33%), Positives = 83/153 (54%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +
Sbjct: 354 HFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVI 413
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TG++LAN +D +H+T ++VAHFH ++ +P G L+
Sbjct: 414 GGITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDERWG 473
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+I + G FFP + LGL G+PRR Y
Sbjct: 474 RISAYCWIFGWMGAFFPLYILGLMGLPRRSVAY 506
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 97.9 bits (233), Expect = 2e-19
Identities = 49/154 (31%), Positives = 75/154 (48%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF
Sbjct: 292 HMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFS 351
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
G GV+ A +D T HDTY+VV HFH + +P TG N +
Sbjct: 352 AGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLG 411
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
KI F F+G + FF QH LG+ G+PRR DYP
Sbjct: 412 KIHFVFSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +3
Query: 24 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 188
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
Score = 49.6 bits (113), Expect = 7e-05
Identities = 36/88 (40%), Positives = 44/88 (50%)
Frame = +1
Query: 364 KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*L 543
KFN Y LE I HF HNIF EYLDDIQI + E+ + +L + L
Sbjct: 115 KFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEMLYQDLDLYYLLLELSISYL 174
Query: 544 LFENQ*LTNELTYFL*ISHHQLNDIKIY 627
LFE + + YFL H LND KI+
Sbjct: 175 LFEKELSQIDQFYFLLNYRHLLNDTKIF 202
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/153 (32%), Positives = 85/153 (55%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL V
Sbjct: 353 HFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLV 412
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG++LA +I+ T+H++ +VVAHFH ++ +P G L++
Sbjct: 413 GGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLDAPSA 471
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+ F++ +G + F LGL G+ RR DY
Sbjct: 472 RANFWSFSVGTVLVFGAMFALGLMGMTRRL-DY 503
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +3
Query: 42 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 203
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 94.7 bits (225), Expect = 2e-18
Identities = 47/154 (30%), Positives = 82/154 (53%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++ VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V
Sbjct: 451 HMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLV 510
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
G TG+ L++ S+++++HDT+YVVAHFH +LS + G+ +
Sbjct: 511 AGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFG 570
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
+ G + F PQ +LG +G+PRR DYP
Sbjct: 571 YMHLIYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/153 (33%), Positives = 81/153 (52%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F +
Sbjct: 298 HMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFII 357
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG TGV L + +ID TY+VVAHFHY+L +P TG + + +
Sbjct: 358 GGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLG 417
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
KI F +GV +TF PQ L +PRRY Y
Sbjct: 418 KIHFALAMLGVALTFLPQ--FALMDMPRRYFTY 448
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 93.5 bits (222), Expect = 4e-18
Identities = 53/155 (34%), Positives = 79/155 (50%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF +
Sbjct: 312 HMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFII 371
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV L +D TY+VVAHFHYV+ YP TG N +
Sbjct: 372 GGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKITGKMYNETLG 430
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KIQF F+G N+ +FP F+ PRR YP+
Sbjct: 431 KIQFGVYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 93.1 bits (221), Expect = 5e-18
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT+G + +F+ +T+IIA+PTG+KIF + TI + + + F+ +F++
Sbjct: 329 HFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSI 388
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPL-FTGLSLNSYI 359
GG +GVIL+ ++D H++ +++AHFH V+ Y L + LN+
Sbjct: 389 GGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCELNN-- 446
Query: 360 LKIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDY 461
K F +F IGV +TFFP +FLG G+ RR + Y
Sbjct: 447 -KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 92.7 bits (220), Expect = 7e-18
Identities = 52/153 (33%), Positives = 79/153 (51%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F +
Sbjct: 306 HMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVI 365
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTGV++A D +HDTY++VAH HYVL P FTG +
Sbjct: 366 GGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNLG 425
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
F+ + IG + TF H+ GL G+ RR +
Sbjct: 426 PTAFWLVVIGFHGTFLLLHWAGLLGMRRRIDSF 458
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 89.8 bits (213), Expect = 5e-17
Identities = 49/152 (32%), Positives = 78/152 (51%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+F G+ F T++I++P+ + + + T+ + Y+ +L LG VF+F V
Sbjct: 328 HMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGV 387
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG+ L + S+D+ LHDT +VV HFH+ ++ +P G L +
Sbjct: 388 GGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLG 447
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 458
KI F+ F+G+ + F Q G AG RR D
Sbjct: 448 KIHFWFTFLGLTLVFGGQLLAGYAGQERRLFD 479
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 88.6 bits (210), Expect = 1e-16
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFT 179
H+FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F
Sbjct: 306 HMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFV 364
Query: 180 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYI 359
+GGLTGV++A D +HDT+++VAH HYVL P TG +
Sbjct: 365 IGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFRV 424
Query: 360 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+ F+ + +G + TF H++GL G RR Y
Sbjct: 425 GDVAFWLVTVGFHATFLAVHWVGLLGQRRRTETY 458
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/154 (29%), Positives = 77/154 (50%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +
Sbjct: 289 HMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLL 348
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG+TGV ID L+ TY+VV HFHY++ +P ++G N +
Sbjct: 349 GGITGVFFPLVPIDYALNGTYFVVGHFHYMVYAILYALLGALFYY-FPFWSGKWYNDDLG 407
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 464
K + G +T G+ G+PRRY+ P
Sbjct: 408 KTGAILLVAGTFLTATGMSIAGILGMPRRYAVIP 441
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 82.6 bits (195), Expect = 8e-15
Identities = 49/153 (32%), Positives = 72/153 (47%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H FT D + T T +++PTG + TI G ++ N +L L + F +
Sbjct: 383 HYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLI 441
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GGLTG+ A+ D+ LH+TY+V+AHFH +P TG +N +
Sbjct: 442 GGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFWG 501
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
K + F+ N TFFP GL G+ RR + Y
Sbjct: 502 KFHAWWSFVFFNCTFFPMFIAGLDGMNRRIAIY 534
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 82.6 bits (195), Expect = 8e-15
Identities = 76/192 (39%), Positives = 82/192 (42%)
Frame = +1
Query: 88 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED*QV*F*PXXXXXXXXXXXXXXXXXXX 267
KFL D +MELKLI+ L FYED L FY Q ED F
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSEDSLELFSLIHPLMLLYMMHIMLSHISI 375
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXAFH*ILIY*KFNFLQYLLE*I*HFFHNIF*V*LEYLD 447
+ I Y KFNFL Y E I F NIF LEYLD
Sbjct: 376 MFFPSGQYLLLSADLFIDTLYLLDYLSIHSYSKFNFLLYSSELISLFSLNIFSGSLEYLD 435
Query: 448 DIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIY 627
DI IIQ EI F H F Y LLFENQ EL Y + LND KIY
Sbjct: 436 DILIIQILTSLEISFHHSDLTFHCLPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKIY 495
Query: 628 HQQNIHIMNYQF 663
QQ+IH+MNYQF
Sbjct: 496 LQQSIHMMNYQF 507
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 79.0 bits (186), Expect = 1e-13
Identities = 50/115 (43%), Positives = 56/115 (48%)
Frame = +3
Query: 42 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 221
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 222 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 386
DI LHDTYYVVAH HYVLS +PLFTGL+L I F I+
Sbjct: 282 DIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 362 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 484
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 77.4 bits (182), Expect = 3e-13
Identities = 49/153 (32%), Positives = 73/153 (47%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H F GI + T I++PT + I +AT+ G + + IL L F +
Sbjct: 319 HTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMI 378
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
GG++GV ++ +ID +H YYVVAHFHY + +P FTG + +
Sbjct: 379 GGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLG 438
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 461
+I + + GVNI +FP F L +PRR Y
Sbjct: 439 RIHWAFAYPGVNILYFPMFF--LYDLPRRVYTY 469
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 75.8 bits (178), Expect = 9e-13
Identities = 48/131 (36%), Positives = 60/131 (45%)
Frame = +2
Query: 92 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXX 271
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLR 83
Query: 272 XXXXXXXCNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTI 451
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPL 143
Query: 452 FRLSRLIYFMK 484
F SRLI +K
Sbjct: 144 FWFSRLILLLK 154
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 8e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 363 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 68.1 bits (159), Expect = 2e-10
Identities = 46/124 (37%), Positives = 53/124 (42%)
Frame = +2
Query: 113 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXX 292
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 293 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 472
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S LI
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLI 150
Query: 473 YFMK 484
+K
Sbjct: 151 QLLK 154
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 27 IDTRAYFTSATIIIAVPTGIKIFR*LAT 110
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = +3
Query: 135 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 311
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIA 383
Query: 312 XN*YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 467
+ +P TG +L +++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 384 YDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +3
Query: 564 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPIL 484
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/72 (47%), Positives = 37/72 (51%)
Frame = +3
Query: 450 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNLP 629
YSDYPD NQR+ LFSLN+PSSIE YQN P
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNFP 60
Query: 630 PAEHSYNELPIL 665
P+EHSYNELPIL
Sbjct: 61 PSEHSYNELPIL 72
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 143
H++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 291 HMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFT 179
H+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT
Sbjct: 31 HMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFT 90
Query: 180 VGGLTG 197
+GG G
Sbjct: 91 MGGRQG 96
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 135 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXX 314
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAY 386
Query: 315 N*YPLFTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRRYS 455
+P G L S L +Q + FIG+ I P H LGL G PRR S
Sbjct: 387 KLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTPWHILGLLGQPRRIS 434
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 564 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPIL 49
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +3
Query: 6 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 95
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 149
H+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 54 HMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL--- 173
H+ T + +D RA+ T +T+++A +G+ + TI T Y+ LG FL
Sbjct: 55 HLQTFPLPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIAL 111
Query: 174 --FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 275
F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 112 IGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 165 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 344
+ LF GG G+I A+ +I++ +H+T ++ HFH + P TG
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRR 418
Query: 345 LNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRR 449
L S + +Q +T F+G+ I H LGL +PRR
Sbjct: 419 LWSPTMALVQAWTWFVGMGIFSHWMHMLGLLSMPRR 454
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 447 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNL 626
RY+DYP+ QR+ LFS+ L SSIE QN
Sbjct: 1 RYADYPEVHTTWNVISTIGSTISFLGILYFFYIIWESLITQRMVLFSIQLCSSIEWLQNS 60
Query: 627 PPAEHSYNELPIL 665
PPAEHSY+ELP+L
Sbjct: 61 PPAEHSYSELPLL 73
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 165 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 344
+ F GG+ G+I A+ ++ +H+T +VV HFH + P TG
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRP 412
Query: 345 LNSYILK---IQFFTIFIGVNITFFPQHFLGLAGIPRR 449
+ K IQ T +G+ + QH LGL G PRR
Sbjct: 413 FSRLAKKLALIQVITWSLGMFLMSTAQHVLGLLGAPRR 450
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +3
Query: 426 GLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSS 605
GL G+PRRYSDYP+ +++ +F LNL +S
Sbjct: 1 GLNGMPRRYSDYPNNYLTWNIMSSIGSMISTFSIIILIYWLWNSLFLKKMTIFKLNLNNS 60
Query: 606 IE*YQNLPPAEHSYNELPIL 665
I N+PP H+Y+ELP++
Sbjct: 61 IGWIHNMPPIGHTYSELPLI 80
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3
Query: 567 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
QRI LF N+ SSIE +QN PPA HSY+E+PIL
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPIL 60
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 171 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL- 347
+F +G++ A +I+ +H+T++VV HFH + P TG L
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFHLTVGTAVALTFMAVSYWFLPQITGKKLW 409
Query: 348 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 458
+ Q F+G+ H GLAG+PRR ++
Sbjct: 410 GKSVALAQVVLWFVGMTFMSNAMHRSGLAGMPRRTAE 446
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 46.0 bits (104), Expect = 8e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 119
H+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 55 HMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 564 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
+QR +F + L SS+E QN PPAEHSYNELP+L
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLL 65
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 45.2 bits (102), Expect = 0.001
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Frame = +3
Query: 54 ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITL 233
+T+ I++ + + +F LA + + I P + L +F + G +GV A + ++ L
Sbjct: 332 STMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYL 391
Query: 234 HDTYYVVAHFHYVLSXXXXXXXXXXXXN*YP-LFTGLSLNSYILKIQFFTIFIGVNITFF 410
H+T +VVAHFH + P + ++L K+ F+ +G F
Sbjct: 392 HNTLWVVAHFHTMALLNIAMVAIALIYYLVPKAYPWVNLYDKWSKVHFWMTLVG-GFGFV 450
Query: 411 PQHFL-GLAGIPRRYS 455
F G+ G+PRRY+
Sbjct: 451 NTWFAEGVLGVPRRYA 466
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 198 VILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK--IQ 371
+ L+ D T HDTYYVVAH HY+ Y L S+ + +
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL---GLLALLVVAVGTAYVLLLRRSVPRIAVSGAVA 85
Query: 372 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 467
+ +G PQ L G+PRRY+DY D
Sbjct: 86 ICMLCLGTAFMVAPQAVLPGGGMPRRYTDYAD 117
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 44.4 bits (100), Expect = 0.003
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 182
H++ V + I + T + +P+ + F AT G + +N +
Sbjct: 298 HLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIA 357
Query: 183 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYIL 362
G+TG+ A S D +H+T +VV HFH ++ Y + T +S +
Sbjct: 358 AGVTGISNATISFDAIVHNTDWVVGHFHAMILFSIVPAAWAVL---YIMITMMSGRIWFS 414
Query: 363 KIQFFTIFIG--VNITFFPQHF--LGLAGIPRRYSDYP 464
K + +IG + TF F +G G+ RR YP
Sbjct: 415 KGMAWLHYIGYMIGTTFLIVGFELIGFYGVVRRAEIYP 452
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 165 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 344
+ LF + G +GV+ A+ +++ +H+T +VV HFH + PL G
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGGVTLTFIATSFLLVPLLFGRD 399
Query: 345 LNSYILKIQFFTI-FIGVNITFFPQHFLGLAGIPRR 449
+ L I T+ F+G I H GL PRR
Sbjct: 400 YVAKKLLIAVPTLWFVGQLIFGIGYHVAGLLHAPRR 435
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 171 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 350
+F GG +G++ A +I+ +H+T +V HFH + +P T +
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFHLTVGTAVALTFMAATYWIWPQITNKPIY 417
Query: 351 SYILKI-QFFTIFIGVNITFFPQHFLGLAGIPRRYSD 458
S + + Q FIG+ + H G+ G PRR ++
Sbjct: 418 SRSIGLFQVVLWFIGMALMSNAMHAQGILGAPRRTAE 454
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 567 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
+++ +F LNL +SIE NLPP EHSY+ELP++
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLV 65
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.018
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +3
Query: 171 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 266
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 41.1 bits (92), Expect = 0.023
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFL 173
H+ T + I R + +T+I+A +G+ + TI T Y+ P + L +
Sbjct: 285 HLQTWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIG 343
Query: 174 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 275
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 564 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 40.3 bits (90), Expect = 0.041
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -1
Query: 121 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI 5
VP + +H K LIPVGT +I+V E+K V S PTVN+
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNM 89
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 39.9 bits (89), Expect = 0.054
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 156 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 335
L + +GG++GV + I+I +H+T YV HFH ++ P+
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFHATVAAGTTLAFMAITYFLVPVLF 410
Query: 336 GLSL-NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 458
G L + K+Q + +G+ + G G+ RR+ D
Sbjct: 411 GRELILPGLAKLQPYLFGLGMGVFSLFMMGAGTLGVSRRHWD 452
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.071
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 165 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 266
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 39.1 bits (87), Expect = 0.094
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +3
Query: 135 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXX 314
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH +
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFHMTVGSAVAMTFMGVAY 405
Query: 315 N*YPLFTGLSLNSYILKIQFFTIF-IGVNITFFPQHFLGLAGIPRR 449
P TG L + + I+ IG+ I GL G+PRR
Sbjct: 406 WMVPYLTGKKLWGRKVALASNWIYTIGLLIFARGMISAGLEGMPRR 451
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 39.1 bits (87), Expect = 0.094
Identities = 13/34 (38%), Positives = 27/34 (79%)
Frame = +3
Query: 564 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
++R+ +F +++P+S+E + PPA+HSY++ P+L
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLL 56
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 438 IPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*Y 617
+PRRYSDYPD ++R+ LF + SS+E
Sbjct: 2 MPRRYSDYPDSYYCWNFISSMGSMISMNSLLFLIFTIFESFMSKRLILFKFH-QSSLEWL 60
Query: 618 QNLPPAEHSYNELPIL 665
N PP H NE+P+L
Sbjct: 61 NNYPPFNHMCNEIPLL 76
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 579 LFSLNLPSSIE*YQNLPPAEHSYNELPIL 665
+FSL+L SSIE + PPA+HSY E+P++
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMI 65
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.1 bits (82), Expect = 0.38
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +3
Query: 39 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 194
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 195 GVILANSSIDITLHDTYYVVAHFH 266
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 564 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 659
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 305 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIY 475
G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++ I+
Sbjct: 18 GLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKNIF 72
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 174 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 266
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,410,642
Number of Sequences: 1657284
Number of extensions: 6701352
Number of successful extensions: 16677
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 16093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16583
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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