Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2a13
(396 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 60 8e-10
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 57 6e-09
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 57 6e-09
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 56 1e-08
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 52 2e-07
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 50 7e-07
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 38 0.003
10_06_0181 - 11532765-11533203,11536867-11537036 36 0.012
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 36 0.016
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 34 0.036
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 34 0.036
01_06_1343 - 36461476-36461961,36463355-36463519 34 0.036
05_07_0127 - 27872803-27873238,27873842-27874059 33 0.11
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 33 0.11
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 31 0.34
03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856 31 0.44
06_03_0414 - 20548577-20549006,20553521-20553744 30 0.78
03_05_0014 - 19726111-19726815 29 1.4
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 29 1.8
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 28 3.1
09_02_0464 - 9591139-9591571,9592601-9592818 28 3.1
05_06_0080 + 25420371-25420423,25420681-25420780,25421742-254218... 28 3.1
04_03_0184 + 12395349-12395542,12396821-12397467,12398119-123986... 27 4.1
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 27 5.5
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867... 27 5.5
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 27 7.2
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 27 7.2
07_01_0685 - 5177340-5177363,5177770-5177865,5177991-5178053,517... 26 9.6
06_03_1187 + 28267535-28267568,28267620-28267645,28267808-282679... 26 9.6
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 26 9.6
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 59.7 bits (138), Expect = 8e-10
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +2
Query: 5 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 184
VPIILVG K DLR+D + P+ +G + + I A AY+ECS+K+++ ++
Sbjct: 126 VPIILVGTKLDLRDDKQFFVD--HPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKA 183
Query: 185 VFETATRAALQVKKKKKTR 241
VF+ A + LQ K+KK +
Sbjct: 184 VFDAAIKVVLQPPKQKKKK 202
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 56.8 bits (131), Expect = 6e-09
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
NVPI+LVG K DLR+ + + + + +G + ++I A AY+ECS+K+++ ++
Sbjct: 111 NVPIVLVGTKLDLRDHRSYLAD--HPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIK 168
Query: 182 EVFETATRAALQVKKKK 232
VF+TA + LQ +++
Sbjct: 169 AVFDTAIKVVLQPPRRR 185
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 56.8 bits (131), Expect = 6e-09
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +2
Query: 5 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 184
VP++LVG K DLR D A + + + ++G + + I A AY+ECS+K++ ++
Sbjct: 144 VPVVLVGTKLDLREDRAYLAD--HPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKA 201
Query: 185 VFETATRAALQVKKKK 232
VF+TA + LQ + K
Sbjct: 202 VFDTAIKVVLQPPRHK 217
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 55.6 bits (128), Expect = 1e-08
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +2
Query: 5 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 184
VPIILVG K DLR+D + P+ +G + ++I A Y+ECS+K++ V+
Sbjct: 124 VPIILVGTKLDLRDDKQFFVD--HPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKG 181
Query: 185 VFETATRAALQ---VKKKKKTR---CSLL 253
VF+ A + LQ KKKKK + CS+L
Sbjct: 182 VFDAAIKVVLQPPKAKKKKKAQRGACSIL 210
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 51.6 bits (118), Expect = 2e-07
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 184
VPI+LVG K DLR D + L PV +G + + I A Y+ECS+K+++ V+
Sbjct: 101 VPIVLVGTKLDLREDKHYL--LDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKA 158
Query: 185 VFETATR-AALQVKKK 229
VF+ A + V+KK
Sbjct: 159 VFDAAIKLQGCHVQKK 174
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 50.0 bits (114), Expect = 7e-07
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 5 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 184
VPI+LVG K DLR D + + M PV +G + ++I A Y+ECS+K+++ V+
Sbjct: 113 VPIVLVGTKLDLREDKHYLLDHPGMI--PVTTAQGEELRKQIGAAYYIECSSKTQQNVKG 170
Query: 185 VFETATR 205
VF+ A +
Sbjct: 171 VFDAAIK 177
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 37.9 bits (84), Expect = 0.003
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N+ I++VGNK DL N LR + +E +G+A+AEK ++LE SA V
Sbjct: 148 NIVIMMVGNKSDL-------NHLRSVPEE-----DGQALAEK-EGLSFLETSALEALNVE 194
Query: 182 EVFETATRAALQVKKKK 232
+ F+T + Q+ KK
Sbjct: 195 KAFQTILKDIHQIISKK 211
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 35.9 bits (79), Expect = 0.012
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N+ I+LVGNK DL ++ A V ++ + AEK N F +LE SA V
Sbjct: 101 NIVIMLVGNKSDLEDERA------------VSTEDAKEFAEKENLF-FLETSALQATNVE 147
Query: 182 EVFETATRAALQVKKKK 232
F+T ++ KK
Sbjct: 148 NAFQTVLSEIFKIHSKK 164
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 35.5 bits (78), Expect = 0.016
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
++ ++LVGNK DL + V QE + AEK N ++E SAK+ + +
Sbjct: 127 DIIMVLVGNKADLHEN------------RHVSSQEAQEYAEK-NNMVFIETSAKTADNIN 173
Query: 182 EVFETATRAALQVKKKK 232
+VFE T AL +K +K
Sbjct: 174 QVFE-VTVFALLIKNRK 189
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 34.3 bits (75), Expect = 0.036
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
NV ILVGNK DL++ V EG+A+AE F ++E SA V
Sbjct: 119 NVVTILVGNKTDLKH------------AREVSTAEGKALAESQGLF-FMETSALDSSNVA 165
Query: 182 EVFETATRAALQVKKKK 232
E F+T + + +K
Sbjct: 166 EAFQTVVKEIYGILSRK 182
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 34.3 bits (75), Expect = 0.036
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 14/73 (19%)
Frame = +2
Query: 2 NVPIILVGNKKD-----LRNDPATI-NELRKMKQ--------EPVKPQEGRAMAEKINAF 139
NVPI+LVG K + ++D I +LR+ KQ P+ +G + I A
Sbjct: 110 NVPIVLVGTKLEEKTLATKSDKNRILADLREDKQFFLDHPGLAPISTAQGEELKRMIGAA 169
Query: 140 AYLECSAKSKEGV 178
AY+ECS+K+++ V
Sbjct: 170 AYIECSSKTQQFV 182
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 34.3 bits (75), Expect = 0.036
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N+ +++VGNK DL N LR + +E +G A +EK ++LE SA V
Sbjct: 117 NIVVMMVGNKSDL-------NHLRSVPEE-----DGHAFSEK-EGLSFLETSALEAINVE 163
Query: 182 EVFETATRAALQVKKKK 232
+ F T Q+ KK
Sbjct: 164 KAFHTVLSEIHQIVSKK 180
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 32.7 bits (71), Expect = 0.11
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N+ I+LVGNK DLR+ LR V ++ +A AEK N F ++E SA V
Sbjct: 117 NIVIMLVGNKADLRH-------LR-----AVSTEDAKAFAEKENTF-FMETSALESMNVE 163
Query: 182 EVF-ETATRAALQVKKK 229
F E T+ V KK
Sbjct: 164 NAFTEVLTQIYHVVSKK 180
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 62 NELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQV 220
N++ K ++ V +EG A A++ +LE SAK++E V + FE L+V
Sbjct: 128 NKVDKNEERMVTREEGLAFAQESGCL-FLESSAKTRENVEKCFEELALKILEV 179
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 62 NELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFE 193
N++ K + V +EG A AE+ +LE SAK+++ V + FE
Sbjct: 138 NKIDKEDERTVTREEGLAFAEESGCL-FLESSAKTRDNVEKCFE 180
>03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856
Length = 1002
Score = 30.7 bits (66), Expect = 0.44
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -1
Query: 213 NAALVAVSNTSRTPSLLLAEHSRYANALIFSAIARPSCGF--TGSCFIL 73
+ + A +N TP LL SRY + + A+A+PS G+ +G+C ++
Sbjct: 387 SGTIPACANKGCTPQLLDDMPSRYPSFFMSKALAQPSSGYCKSGNCSVV 435
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 29.9 bits (64), Expect = 0.78
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N+ ++LVGNK DLR+ A V+ EG+A AE+ + + ++E SA V
Sbjct: 119 NIVVMLVGNKSDLRHLVA------------VQTDEGKAFAERESLY-FMETSALESTNVE 165
Query: 182 EVF-ETATRAALQVKKK 229
F E T+ V K+
Sbjct: 166 NAFAEVLTQIYRIVSKR 182
>03_05_0014 - 19726111-19726815
Length = 234
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 107 GRAMAEKINAFAYLECSAKSKEGVREVFETATRAA 211
G A+A+ +++ +++ C A EG R V T RAA
Sbjct: 78 GDAVADGVDSASFVRCGAARAEGARAVSVTRCRAA 112
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 17 LVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFET 196
LVGNK DL ++ + V Q+ + AE+ N ++E SAK+ + + ++FE
Sbjct: 187 LVGNKADLHDNRS------------VSSQDAQEYAER-NTMFFIETSAKTADNINQLFEV 233
Query: 197 ATRA 208
R+
Sbjct: 234 CIRS 237
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2
Query: 62 NELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTR 241
N+ ++ V +E + A++ N ++E SAK+ V +VF + LQ ++ + T
Sbjct: 124 NKADMVEARQVPAEEAKTYAQE-NGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTP 182
Query: 242 CSLL 253
++
Sbjct: 183 AGMV 186
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 27.9 bits (59), Expect = 3.1
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N+ I+LVGNK DLR+ LR V ++ + AE+ + F ++E SA V
Sbjct: 117 NIVIMLVGNKADLRH-------LR-----AVSVEDAKGFAERESTF-FMETSALESMNVE 163
Query: 182 EVF-ETATRAALQVKKK 229
F E T+ V KK
Sbjct: 164 SAFTEVLTQIYRVVSKK 180
>05_06_0080 +
25420371-25420423,25420681-25420780,25421742-25421888,
25421959-25422039,25422147-25422296
Length = 176
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
N P +L+GNK D+ + + V ++ +A Y E SAK V
Sbjct: 108 NFPFVLLGNKVDVDGGNSRV----------VSEKKAKAWCASKGNIPYFETSAKDGTNVE 157
Query: 182 EVFETATRAALQ 217
E F+ + AL+
Sbjct: 158 EAFQCIVKNALK 169
>04_03_0184 +
12395349-12395542,12396821-12397467,12398119-12398655,
12399087-12399239,12399315-12399809,12400032-12400555
Length = 849
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 216 CNAALVAVSNTSRTPSLLLAEHSRYANALIFSAIARPSCGFTGSCFI 76
C ++N S +P+ + + S N I +AR SC TG C I
Sbjct: 128 CEFDTYIINNKSYSPTTAICKSS-CPNKEITETVARQSCNGTGCCTI 173
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 2 NVPIILVGNKKDLRN 46
N+PI+L GNK D++N
Sbjct: 545 NIPIVLCGNKVDMKN 559
>03_05_0179 -
21583234-21584336,21586274-21586358,21586665-21586713,
21586801-21586874,21586958-21587050,21587120-21587174,
21587348-21587421,21587702-21587814,21587911-21588168,
21588915-21589012,21589139-21589256,21589754-21589848,
21590001-21590159,21590336-21590525,21590881-21591021,
21591142-21591176,21591659-21591699
Length = 926
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 173 GVREVFETATRAALQVKKKKK 235
GV +FE A+R +VKKKKK
Sbjct: 364 GVTALFEAASRHITEVKKKKK 384
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 2 NVPIILVGNKKDLRN 46
N+PI+L GNK D++N
Sbjct: 117 NIPIVLCGNKVDVKN 131
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 2 NVPIILVGNKKDLRN 46
N+PI+L GNK D++N
Sbjct: 117 NIPIVLCGNKVDVKN 131
>07_01_0685 -
5177340-5177363,5177770-5177865,5177991-5178053,
5178138-5178232,5178941-5179028,5179372-5179444,
5179866-5179920,5180355-5180463
Length = 200
Score = 26.2 bits (55), Expect = 9.6
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 2 NVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVR 181
NV ILVGNK D+ + V +G+ +A++ + E SAK+ + V
Sbjct: 124 NVNKILVGNKVDMDT------------KRVVSTAQGQKLADEYG-MKFFETSAKTNQNVE 170
Query: 182 EVFETATR 205
+VF T R
Sbjct: 171 QVFFTIAR 178
>06_03_1187 +
28267535-28267568,28267620-28267645,28267808-28267975,
28268148-28268196,28268329-28268402,28268512-28268841
Length = 226
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 62 NELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVF 190
N++ ++ V QE AE+ N ++E SAK+ + V E+F
Sbjct: 104 NKVDLEEKRQVGTQEAMEYAER-NGLFFIETSAKTSQNVTELF 145
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 26.2 bits (55), Expect = 9.6
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = +2
Query: 5 VPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRE 184
VP+IL G K DL + K +Q ++ M YLECSA + V E
Sbjct: 97 VPVILAGCKVDLSD---------KQQQAGLENVLDFIMCTFREVEIYLECSALHRIKVDE 147
Query: 185 VFETATRAALQ 217
VF A A L+
Sbjct: 148 VFYCAQMAVLR 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,025,732
Number of Sequences: 37544
Number of extensions: 180053
Number of successful extensions: 454
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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