Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2a12
         (372 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.          28   8.4  
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.       28   8.4  
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.             28   8.4  
BC085610-1|AAH85610.1|  578|Homo sapiens ZFHX4 protein protein.        28   8.4  
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    28   8.4  
AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens ...    28   8.4  
AK131399-1|BAD18546.1|  907|Homo sapiens protein ( Homo sapiens ...    28   8.4  
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain...    28   8.4  

>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
          Length = 2185

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 121  LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNV 228
            L  QL NS+ +++ ++A+   +  Y+E+K E++  V
Sbjct: 1379 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1414


>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
          Length = 2230

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 121  LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNV 228
            L  QL NS+ +++ ++A+   +  Y+E+K E++  V
Sbjct: 1379 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1414


>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
          Length = 2083

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 121  LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNV 228
            L  QL NS+ +++ ++A+   +  Y+E+K E++  V
Sbjct: 1234 LNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV 1269


>BC085610-1|AAH85610.1|  578|Homo sapiens ZFHX4 protein protein.
          Length = 578

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 231 EQTDTKQQDELHGVRLSTLAPGLQGHRPGLFP 326
           +Q        LHG+ L T  PGL G  P L P
Sbjct: 41  QQPGMMDSSSLHGISLPTAYPGLPGLPPVLLP 72


>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 231  EQTDTKQQDELHGVRLSTLAPGLQGHRPGLFP 326
            +Q        LHG+ L T  PGL G  P L P
Sbjct: 3034 QQPGMMDSSSLHGISLPTAYPGLPGLPPVLLP 3065


>AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16624 fis, clone TESTI4015442, moderately
           similar to Mus musculus zinc finger homeodomain 4
           (Zfh4-pending). ).
          Length = 1103

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 231 EQTDTKQQDELHGVRLSTLAPGLQGHRPGLFP 326
           +Q        LHG+ L T  PGL G  P L P
Sbjct: 566 QQPGMMDSSSLHGISLPTAYPGLPGLPPVLLP 597


>AK131399-1|BAD18546.1|  907|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16492 fis, clone CTONG2028758, highly  similar
           to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
           protein 4. ).
          Length = 907

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 231 EQTDTKQQDELHGVRLSTLAPGLQGHRPGLFP 326
           +Q        LHG+ L T  PGL G  P L P
Sbjct: 770 QQPGMMDSSSLHGISLPTAYPGLPGLPPVLLP 801


>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
            protein 4 protein.
          Length = 3599

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 231  EQTDTKQQDELHGVRLSTLAPGLQGHRPGLFP 326
            +Q        LHG+ L T  PGL G  P L P
Sbjct: 3062 QQPGMMDSSSLHGISLPTAYPGLPGLPPVLLP 3093


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,985,017
Number of Sequences: 237096
Number of extensions: 789715
Number of successful extensions: 2266
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2264
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)