Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2a11
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.20 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   5.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 492 VKLLNQKYNNKHFNDFKPMEDTIYA---DEDQDLSTLETADKEEDKDKSNYDSLEK 650
           +KL+ +K   K  +D +  E+       D+D+D   +E   ++ED+D    D  +K
Sbjct: 211 IKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKK 266



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 540 KPMEDTIYADEDQDLSTLETADKEEDKDKSNYD 638
           KP  + +  DED+D    +   K+  K+K   D
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTED 276


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -1

Query: 291  HHPS-SSWTHPSLPSWFPFACTS 226
            H PS SSW  P+ PS+ P + T+
Sbjct: 1159 HKPSTSSWQKPTKPSYRPPSTTN 1181


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 313 PPYCLSKSPPIKFLD 269
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 313 PPYCLSKSPPIKFLD 269
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 313 PPYCLSKSPPIKFLD 269
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 313 PPYCLSKSPPIKFLD 269
           PPY   +SPP+ FL+
Sbjct: 442 PPYLFFESPPVVFLN 456


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 109 QKKCWCDKTDAVEC 68
           ++K WCD  + V+C
Sbjct: 462 EEKLWCDYPEVVKC 475


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -2

Query: 188 HCVNTAPANGRCHC 147
           HCVN      RC C
Sbjct: 43  HCVNLPGVGHRCQC 56


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 292 SPPIKFLDASFTSFMVSFCVYIVI 221
           +PPIKF++ S T    +  +Y V+
Sbjct: 41  APPIKFINKSSTDKFGNGAIYEVL 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,936
Number of Sequences: 336
Number of extensions: 3532
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)