Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2a06
         (427 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   2.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   2.0  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   2.6  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   4.5  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   6.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      22   7.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   7.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   7.9  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 42  PNSLKKHRRRRKDPVAAKPRRR 107
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 66  RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRK 191
           RRR+  +A   RRR  P+ +     TTR     P  R  T++
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 16   AQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 117
            A EGRE       +    + RIR    Q++EVV+
Sbjct: 1099 ATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 196 WDFLVQFLICGFIKQHLVVQL-VTNFS 119
           W F VQF+ C  I   L++ + VT FS
Sbjct: 284 WVFFVQFIQCTMIWCSLILYIAVTGFS 310


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 25  GREGFGQTASKNTEEEGRIR 84
           G  GFGQ  + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 42  PNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 137
           PN L++      K+PV  KP+    P+ + VT+
Sbjct: 125 PNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 347 WSHACRSPAHGVGL 306
           +SH C SP  G GL
Sbjct: 116 YSHGCMSPEQGGGL 129


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 158 DKPTYEKLYKEVPQYKLITPAVVSERLKV 244
           + P+ + L KEVP  K+      S  LKV
Sbjct: 633 ETPSDQPLIKEVPMNKIQVGGAPSPNLKV 661


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 139 QLVTNFSFGP 110
           Q+ TNFSFGP
Sbjct: 338 QVYTNFSFGP 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,680
Number of Sequences: 2352
Number of extensions: 8964
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)