Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2a05
         (277 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058257-1|AAL13486.1|  465|Drosophila melanogaster GH01515p pro...    27   3.6  
AF181686-1|AAD54422.1|  465|Drosophila melanogaster membrane pro...    27   3.6  
AE014296-2737|AAF49464.2|  465|Drosophila melanogaster CG4672-PA...    27   3.6  
AY089293-1|AAL90031.1|  462|Drosophila melanogaster AT08706p pro...    27   4.7  
AE013599-2034|AAF58152.1|  481|Drosophila melanogaster CG8102-PA...    27   4.7  
AE013599-2033|AAM68529.1|  462|Drosophila melanogaster CG8102-PB...    27   4.7  
AE014296-166|AAN11456.1|  804|Drosophila melanogaster CG18214-PD...    26   8.2  

>AY058257-1|AAL13486.1|  465|Drosophila melanogaster GH01515p
           protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 151 MGAVLGLCSAAQLXXXXXXXXXXXXXXXXXXXTNSXXSRLM 273
           MGA LG+CSAAQ                    TN+  SR M
Sbjct: 1   MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFM 41


>AF181686-1|AAD54422.1|  465|Drosophila melanogaster membrane
           protein TMS1d protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 151 MGAVLGLCSAAQLXXXXXXXXXXXXXXXXXXXTNSXXSRLM 273
           MGA LG+CSAAQ                    TN+  SR M
Sbjct: 1   MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFM 41


>AE014296-2737|AAF49464.2|  465|Drosophila melanogaster CG4672-PA
           protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 151 MGAVLGLCSAAQLXXXXXXXXXXXXXXXXXXXTNSXXSRLM 273
           MGA LG+CSAAQ                    TN+  SR M
Sbjct: 1   MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFM 41


>AY089293-1|AAL90031.1|  462|Drosophila melanogaster AT08706p
           protein.
          Length = 462

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 235 MLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSHXVLIVXSVL 104
           M+N ++ K       P     KG   HP LV N+  + +V ++L
Sbjct: 216 MINCLMGKLGRPRRRPPFLTEKGYFEHPSLVINAESIAVVPTIL 259


>AE013599-2034|AAF58152.1|  481|Drosophila melanogaster CG8102-PA,
           isoform A protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 235 MLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSHXVLIVXSVL 104
           M+N ++ K       P     KG   HP LV N+  + +V ++L
Sbjct: 235 MINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTIL 278


>AE013599-2033|AAM68529.1|  462|Drosophila melanogaster CG8102-PB,
           isoform B protein.
          Length = 462

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 235 MLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSHXVLIVXSVL 104
           M+N ++ K       P     KG   HP LV N+  + +V ++L
Sbjct: 216 MINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTIL 259


>AE014296-166|AAN11456.1|  804|Drosophila melanogaster CG18214-PD,
           isoform D protein.
          Length = 804

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 245 QDGHAEQHSEQAVXPQXHASCAAEQRPNTAPI 150
           ++GH++Q       P   A+ ++   PN AP+
Sbjct: 100 KNGHSQQEQSPFTFPAVSATSSSNPAPNPAPV 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,718,881
Number of Sequences: 53049
Number of extensions: 111341
Number of successful extensions: 214
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 24,988,368
effective HSP length: 70
effective length of database: 21,274,938
effective search space used: 446773698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)