Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2a05
         (277 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    26   4.4  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     26   4.4  

>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 247 CKMXMLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSH 131
           C+M + N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 247 CKMXMLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSH 131
           C+M + N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 247 CKMXMLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSH 131
           C+M + N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 247 CKMXMLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSH 131
           C+M + N  +++      +PA  Q     L P  +F +H
Sbjct: 573 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 611


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 247 CKMXMLNNIVNKQXCHSXTPAVXQNKGPTLHPFLVFNSH 131
           C+M + N  +++      +PA  Q     L P  +F +H
Sbjct: 597 CQMELFNECIDESATQQQSPAQSQQPSVALKPSSMFANH 635


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,487,758
Number of Sequences: 27780
Number of extensions: 59906
Number of successful extensions: 98
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)