Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29p24
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical ... 252 2e-67
AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical ... 251 4e-67
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 112 3e-25
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 59 3e-09
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 43 2e-04
U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical pr... 38 0.009
U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical pr... 34 0.11
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 31 0.61
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 30 1.4
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 30 1.9
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 30 1.9
AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine re... 29 2.4
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 5.7
U41559-1|AAC24260.1| 373|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 28 5.7
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical
protein F40A3.3a protein.
Length = 221
Score = 252 bits (617), Expect = 2e-67
Identities = 114/190 (60%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
Frame = +1
Query: 145 RAMSTVA-KSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWD 318
R ++T+A ++F +V+PDV+ P+ ++ VK+ SGVE GN LTPTQVKD P VKWD
Sbjct: 32 RGLATMAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWD 91
Query: 319 AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGL 498
AEPG YTL TDPDAPSRKEPT+REWHHWLV NI GN++ G+TLS+Y+G+GPP KTGL
Sbjct: 92 AEPGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGL 151
Query: 499 HRYVFLLYKQPSKL-TFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDDY 675
HRYV+L+YKQ ++ + RLTNTS DKR +K A+F K+ LG P+ GN ++A+YDDY
Sbjct: 152 HRYVYLIYKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQAEYDDY 211
Query: 676 VPILYKQLGA 705
VPIL KQLGA
Sbjct: 212 VPILNKQLGA 221
>AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical
protein F40A3.3b protein.
Length = 185
Score = 251 bits (614), Expect = 4e-67
Identities = 112/183 (61%), Positives = 140/183 (76%), Gaps = 2/183 (1%)
Frame = +1
Query: 163 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYY 339
A++F +V+PDV+ P+ ++ VK+ SGVE GN LTPTQVKD P VKWDAEPG Y
Sbjct: 3 AEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAEPGALY 62
Query: 340 TLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLL 519
TL TDPDAPSRKEPT+REWHHWLV NI GN++ G+TLS+Y+G+GPP KTGLHRYV+L+
Sbjct: 63 TLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLI 122
Query: 520 YKQPSKL-TFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQ 696
YKQ ++ + RLTNTS DKR +K A+F K+ LG P+ GN ++A+YDDYVPIL KQ
Sbjct: 123 YKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQAEYDDYVPILNKQ 182
Query: 697 LGA 705
LGA
Sbjct: 183 LGA 185
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 112 bits (269), Expect = 3e-25
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Frame = +1
Query: 151 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKW---DA 321
MS ++ +F ++ P +I AP L + + G++V+ G + +K+ P +W A
Sbjct: 1 MSDISAAFAQHEITPKIIENAPKQKLHLCW-DGIQVEPGMTMQVRNLKNAP--RWALPGA 57
Query: 322 EPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNE----VNSGETLSQYVGSGPPEK 489
+P YT+ M DPD SRK P+ EW HWLV NI + +N G+ Y P +
Sbjct: 58 DPESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNIPASNIIDGINGGQHQMAYGSPAPGPR 117
Query: 490 TGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYD 669
T LHRYV L+++ + R++ RA F + +F +K LGDPIAGNF+ AQ++
Sbjct: 118 TDLHRYVILMWEHAGR------RISVPKPSSRAKFNVKQFIEKNKLGDPIAGNFFLAQHE 171
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 226 LQVKYPSGVEVKEGNELTPTQVKDEPSVKWDA--EPGQYYTLAMTDPDAPSRKEPTFREW 399
LQV + + + V GN +T P + ++ G + TL M + D + E
Sbjct: 157 LQVNFENDIVVHSGNVITANSTLKRPEITIESVGNGGGFNTLLMINLDGNALDLGKNGEI 216
Query: 400 HHWLVGNI-QGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSS 576
W++ NI G +++G + Y+ P TG HR F+L++ + F ++ S
Sbjct: 217 VQWMISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVLFRHEKPVDF---QIQGNSL 273
Query: 577 DKRANFKIAEFAKKYNLG-DPIAGNFYEAQYDDYVPILYKQLG 702
D R + +I++F KK+ P A F++ YD+ V + LG
Sbjct: 274 DTRIH-EISKFYKKHEATITPSAIRFFQTSYDNSVKMALHGLG 315
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +2
Query: 455 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GI 634
C ST+ +K Q C TCS C+++ SS S+S S + ++ S SS S++
Sbjct: 18 CTSTFYTTAQKTQYCASTCSLCSDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSS 77
Query: 635 RLRATSTKRSMTTTSLFCTSS 697
+TS+ + T S TSS
Sbjct: 78 SASSTSSSDTTTADSSSTTSS 98
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 455 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 583
C S++ K Q C TCS C+++ SS S+S S + T+
Sbjct: 147 CTSSFYTTAIKTQYCAATCSLCSSSSDSSSSSSTASTSSSCTD 189
>U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical
protein F41G3.20 protein.
Length = 232
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +2
Query: 446 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT 625
A C ++ L L K+Q C TC CT++ ++ S+S + L + +S P T
Sbjct: 101 ASYCANSAYLTLMKQQ-CPKTCGYCTSSSATTTSSSSTCIDLTNASTGVSDCPGMASYCT 159
Query: 626 *GIRLRATSTKRSMTTTSLFCTSSS 700
L T K+ T +CTSSS
Sbjct: 160 NSAYL--TLMKQQCPKTCGYCTSSS 182
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 446 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS 553
A C ++ L L K+Q C TC CT++ SS S+S
Sbjct: 155 ASYCTNSAYLTLMKQQ-CPKTCGYCTSSSSSSSSSS 189
>U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical
protein F41G3.19 protein.
Length = 146
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +2
Query: 446 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT 625
A C ++ L L K Q C TC CT++ +S +TS S + TN + ++
Sbjct: 64 ASYCTNSVYLTLMKTQ-CPKTCGYCTSSSSTSSTTSSSSTCVDLTNASTGVSDCTRMASY 122
Query: 626 *GIRLRATSTKRSMTTTSLFCTS 694
+ T K+ T +CTS
Sbjct: 123 CTNSIYLTLMKQQCPKTCGYCTS 145
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 403 HWLVGNIQGNEVNS----GETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNT 570
HWL +I +N+ G T + YV P + + H Y+F+L QP+ + E
Sbjct: 375 HWLEVDIPAANLNAANGNGLTKADYVPLIPKKPSTCHSYLFVLLAQPASMQTLE-SYCEG 433
Query: 571 SSDKRANFKIAEFAKKYNL 627
+ R F++ F +++ L
Sbjct: 434 MCETRKKFRLELFKQQHGL 452
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 500 CRPVFSGG-PEPTYWDKVSPEFTSLPWMLPTSQWCHSRNVGSLRDG--ASGSVMA 345
CRP SGG P PTY D S P T+Q + VG++ +G +G MA
Sbjct: 18 CRPHTSGGAPNPTYSD-ASTTLLKYPLAAGTNQNRRRQQVGTMNNGDPVAGGPMA 71
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +1
Query: 268 NELTPTQVKDEPSVKWDA-EPGQYYTLAMTDPDAPSRKEPTF----REWHHWLVGNIQGN 432
N L +V+ + V DA E G ++ T+P P + P E W + GN
Sbjct: 324 NLLEKVRVRCDTDVVRDAKEKGYNHSTDSTEPAIPPSEAPKIPSLSSEQKQWKDQLLNGN 383
Query: 433 EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTF 546
E+ GE L + + P+K LH L++ P K F
Sbjct: 384 EILIGEELDRVLADVSPQKP-LH----LMFIAPGKGRF 416
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +1
Query: 268 NELTPTQVKDEPSVKWDA-EPGQYYTLAMTDPDAPSRKEPTF----REWHHWLVGNIQGN 432
N L +V+ + V DA E G ++ T+P P + P E W + GN
Sbjct: 324 NLLEKVRVRCDTDVVRDAKEKGYNHSTDSTEPAIPPSEAPKIPSLSSEQKQWKDQLLNGN 383
Query: 433 EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTF 546
E+ GE L + + P+K LH L++ P K F
Sbjct: 384 EILIGEELDRVLADVSPQKP-LH----LMFIAPGKGRF 416
>AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine
receptor, class sx protein7 protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 529 VVCTRGTRICAGLSFPEVQSPRT 461
++C GT + GL+FP++Q RT
Sbjct: 58 IICLLGTMVDVGLAFPDIQLDRT 80
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 652 RSCPQSDPLGCTSWRTRQF 596
+SCP D GCT+W+ F
Sbjct: 251 KSCPSVDSYGCTNWKNYDF 269
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 497 CTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRS-TT*GIRLRATSTKRSMTT 673
C TC CT+ ++ ST+ + + ++P + TT T + TT
Sbjct: 183 CRKTCKRCTSGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAAAATT 242
Query: 674 TSLFCTS 694
T+ CTS
Sbjct: 243 TAAACTS 249
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/93 (26%), Positives = 37/93 (39%)
Frame = +2
Query: 401 TTGWLATSRATR*TPAKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRAT 580
TT +T +T P T A+ T T T+ +S +++ S T T
Sbjct: 283 TTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSST-STT 341
Query: 581 NVPISKLPSSPRSTT*GIRLRATSTKRSMTTTS 679
S + SSP STT + T+T +T S
Sbjct: 342 QQSSSTITSSPSSTTLSTSIPTTTTPEITSTLS 374
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +2
Query: 485 KRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRS 664
KR A +TC T S+ +T+ + T+ +T + +P+S + T + +TST
Sbjct: 259 KRDAGDNTCDY-TIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAM---STSTSTP 314
Query: 665 MTTTSLFCTSSS 700
T+T++ TS++
Sbjct: 315 STSTTIESTSTT 326
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/93 (26%), Positives = 37/93 (39%)
Frame = +2
Query: 401 TTGWLATSRATR*TPAKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRAT 580
TT +T +T P T A+ T T T+ +S +++ S T T
Sbjct: 283 TTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSST-STT 341
Query: 581 NVPISKLPSSPRSTT*GIRLRATSTKRSMTTTS 679
S + SSP STT + T+T +T S
Sbjct: 342 QQSSSTITSSPSSTTLSTSIPTTTTPEITSTLS 374
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +2
Query: 485 KRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPISKLPSSPRSTT*GIRLRATSTKRS 664
KR A +TC T S+ +T+ + T+ +T + +P+S + T + +TST
Sbjct: 259 KRDAGDNTCDY-TIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAM---STSTSTP 314
Query: 665 MTTTSLFCTSSS 700
T+T++ TS++
Sbjct: 315 STSTTIESTSTT 326
>U41559-1|AAC24260.1| 373|Caenorhabditis elegans Hypothetical
protein C26B2.8 protein.
Length = 373
Score = 28.3 bits (60), Expect = 5.7
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Frame = +1
Query: 169 SFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTP---TQVKDEP--SVKWDAEPGQ 333
+F +++VP ++P APA L + S ++ G ++ D P S + + +
Sbjct: 201 TFRENRIVPRLLPVAPAYELIATF-SDEQISMGQLFDADILDKLADPPVMSAGVELQDEK 259
Query: 334 YYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG--NEVNSGETLSQYVGSGPPEKT----G 495
YT+ + D + K T WLV NI ++ V PP+ T G
Sbjct: 260 LYTIILAD---ATSKAVT------WLVANIAAFDGQLEIHRRTKSAVSYQPPDSTDRPVG 310
Query: 496 LHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKY 621
+H + LY+Q T+ + L + D +F E+ ++Y
Sbjct: 311 MHTMILALYEQND--TWTQKDLARIAMD---DFNFTEWLEEY 347
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 1 VASRSLIFGLISRHPFFLVCERQEMGALIRCAIVLLTVATMVNFRVLTRAMSTVAK 168
+A +IF L F V E ++MG +RC V++ + N VL R M +A+
Sbjct: 1629 LAEPIIIFDLYEN--FLNVSEVEDMGERVRCLSVMIELLPKPNRAVLDRLMYHLAR 1682
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -2
Query: 621 VLLGELGNFEIGTFVARSVSESRLVECELRWLFVQEEHVSVQACLFRRSR 472
V+ LG+ G + + + EC LR+L ++H + CL + R
Sbjct: 1536 VVQSVLGDNTAGGYATAAAGVETVDECGLRYLMAMKQHEYLMVCLPMKQR 1585
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/94 (22%), Positives = 40/94 (42%)
Frame = +2
Query: 401 TTGWLATSRATR*TPAKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRAT 580
TT T+ T T ++ +T + T T S+ T ++ +T+ + T T
Sbjct: 36 TTEATTTTEITT-TTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTT 94
Query: 581 NVPISKLPSSPRSTT*GIRLRATSTKRSMTTTSL 682
+ + P++ STT T+ + TTT++
Sbjct: 95 STTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTM 128
>AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical
protein F42G8.5 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +1
Query: 148 AMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEG-NELTPTQVKDEPSVKWDAE 324
AMS V K + ++ P VIP L + P+ + V N L T V S D
Sbjct: 188 AMSNVVKPHDEKKLYPPVIPGCSTLSLHRRSPNNIFVASPYNTLRATSVGRYQSGFLDTN 247
Query: 325 PGQYYTLAMTDPDAPSRKE 381
L P SR++
Sbjct: 248 SIMENRLGSRQPSVASRRQ 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,032
Number of Sequences: 27780
Number of extensions: 396755
Number of successful extensions: 1310
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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