Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29p18
(306 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0306 + 2499350-2499678,2500041-2500137 31 0.18
01_02_0007 + 10132380-10133201 29 0.55
04_04_1413 - 33386049-33386339 29 0.72
05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515 29 0.95
04_04_1156 - 31319747-31320085,31320556-31320706,31320795-313210... 29 0.95
02_04_0166 - 20508656-20509092,20509282-20509372 29 0.95
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 0.95
01_01_0082 + 625198-625719 29 0.95
09_04_0130 - 14905044-14905505,14905865-14905933,14906000-149061... 28 1.3
05_02_0164 - 7240739-7243051,7243902-7244036,7244322-7245371 28 1.3
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 28 1.7
02_01_0377 + 2728892-2729187,2729483-2729544,2730516-2730570,273... 28 1.7
06_03_0543 + 21967787-21970261 27 2.2
03_05_0543 - 25404630-25405408,25405461-25405605 27 2.2
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 27 2.2
01_05_0208 - 19291953-19292552,19293027-19293134,19293231-192933... 27 2.9
09_04_0660 - 19286653-19287271,19287791-19287916,19288016-192882... 27 3.8
06_03_0757 + 24267599-24268882 27 3.8
06_03_0704 + 23706318-23707024,23707093-23707222 27 3.8
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 27 3.8
03_02_0337 + 7594259-7594319,7594455-7595205,7596323-7596509 27 3.8
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 27 3.8
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 26 5.1
07_03_1061 + 23651404-23651625,23651764-23652954 26 5.1
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 26 5.1
06_03_1471 + 30374988-30375959 26 5.1
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 26 5.1
05_03_0394 - 13440871-13441098,13441197-13441394,13441491-134415... 26 5.1
02_02_0327 - 8983983-8985878 26 5.1
09_06_0366 + 22596192-22596392,22599777-22599875,22599962-226004... 26 6.7
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 26 6.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 26 6.7
06_03_1153 - 28047125-28047751 26 6.7
05_05_0356 - 24373879-24374469 26 6.7
02_05_0646 - 30598769-30599293 26 6.7
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 26 6.7
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644... 26 6.7
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 26 6.7
01_01_0073 + 555485-556315 26 6.7
11_01_0198 - 1556215-1556298,1556412-1556580,1556666-1556921,155... 25 8.9
10_08_0648 + 19579299-19580618 25 8.9
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 25 8.9
10_08_0236 + 16078162-16078731 25 8.9
08_02_0839 + 21693348-21694853 25 8.9
08_01_0134 + 1067826-1068158 25 8.9
06_03_1326 - 29355467-29355817 25 8.9
05_01_0204 - 1461676-1462033,1462173-1462240 25 8.9
03_06_0037 + 31222963-31223886,31225172-31225786 25 8.9
02_05_0185 + 26562545-26562685,26563354-26563452 25 8.9
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 25 8.9
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 25 8.9
>01_01_0306 + 2499350-2499678,2500041-2500137
Length = 141
Score = 31.1 bits (67), Expect = 0.18
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 215 TLAKPAGWPLWQP*ADPNDVIPI 147
TL + WP+WQP D N ++P+
Sbjct: 119 TLGELMDWPIWQPSQDLNSILPV 141
>01_02_0007 + 10132380-10133201
Length = 273
Score = 29.5 bits (63), Expect = 0.55
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = -2
Query: 191 PLWQP*ADPNDVIPI---S*RLPPLPMVRGPPESPLQVLRPLEPST---QRVEAMITLFP 30
PL QP DPN+ P+ PP P+ + P SP Q L +P+T Q++ A I+ P
Sbjct: 187 PLPQP--DPNNPQPLPQPDPNAPPQPLPQPDPNSPPQPLPQPDPNTPPGQQINAKISSQP 244
Query: 29 N 27
+
Sbjct: 245 D 245
>04_04_1413 - 33386049-33386339
Length = 96
Score = 29.1 bits (62), Expect = 0.72
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +1
Query: 61 CVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAG 204
C DGS GR +G GG G GG G G GC G +G
Sbjct: 50 CADGSGGRRRRTGGGGG----GGGGGGGCGGGGGGGGGGGCGGGGGSG 93
>05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515
Length = 785
Score = 28.7 bits (61), Expect = 0.95
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 115 LTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSW 234
+ +G GG ++ TS A G R HP FA+ F SW
Sbjct: 13 VAVGGGGGQKTP--TSPRGAPGADRRHPRPFAKNLDFASW 50
>04_04_1156 -
31319747-31320085,31320556-31320706,31320795-31321026,
31321121-31321331,31321646-31321764,31321835-31322032,
31322163-31322364,31322456-31322832,31322937-31323007,
31326264-31326329,31326414-31326479,31326761-31326835,
31326944-31327018,31327115-31327186,31327683-31327904,
31328012-31328083,31328425-31328496,31329410-31329481,
31329716-31329896,31332132-31332237
Length = 992
Score = 28.7 bits (61), Expect = 0.95
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 NVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPA-GFAR 213
N + ST C GS ++ + + GGPLT GS R + G A G P G +
Sbjct: 369 NCLQRSTPCFLGSPKTASFAVNCGGPLTSGSDNLRYQSDEVNLGDASYYITGEPTWGVST 428
Query: 214 VTSF 225
V F
Sbjct: 429 VGRF 432
>02_04_0166 - 20508656-20509092,20509282-20509372
Length = 175
Score = 28.7 bits (61), Expect = 0.95
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 64 VDGSNGRSTCSGDSGGPLTIGSGGSR-QLIGITSFGSAQGCQRGHPA 201
V GS+ R + G SGG G GG+R Q+ + + G+A RG+ A
Sbjct: 31 VRGSHARRSKRGISGGAGCGGGGGARGQVTAVGASGAAAEDARGYDA 77
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 0.95
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 191 PLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRP 78
P + P A P + + + PP+P + PP P Q P
Sbjct: 322 PYYAPPAQPTETMHQQYQAPPVPQPQAPPAPPQQYQTP 359
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 0.95
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -2
Query: 212 LAKPAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPST 63
L P G P DV+P PP P V PP SP V P P+T
Sbjct: 40 LPSPCGTTCTYASPPPPDVLPTPVYYPPPPPVYYPPPSPPPVAYP-PPTT 88
>09_04_0130 -
14905044-14905505,14905865-14905933,14906000-14906104,
14906625-14906690,14907080-14907268,14907353-14907439,
14907597-14908118
Length = 499
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Frame = +1
Query: 58 LCVDGSNGRSTCSGDSGG-------PLTIGSGGS----RQLIGITSFGSAQGCQRG--HP 198
+ + G GRS G GG PLT+GSGGS + L+ + SA G G +
Sbjct: 125 MMLQGLGGRSPAGGGGGGGDGGLLLPLTLGSGGSGGDVQALLKAAAANSAGGGDAGGVYG 184
Query: 199 AGFA 210
GFA
Sbjct: 185 GGFA 188
>05_02_0164 - 7240739-7243051,7243902-7244036,7244322-7245371
Length = 1165
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 112 PLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSW 234
PL+ G+ GSR L+ + G A+G + H ++ F+ W
Sbjct: 304 PLSSGASGSRVLLTTRNEGVARGMRAQHLHPVEKLDRFDGW 344
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 230 ELKDVTLAKPAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESP 96
E D L + PL + DP DV+ + PP P GPP+ P
Sbjct: 143 ECVDTWLDAHSTCPLCRSRVDPEDVLLLP--EPPKPSTTGPPDPP 185
>02_01_0377 +
2728892-2729187,2729483-2729544,2730516-2730570,
2730784-2730858,2730980-2731054,2731155-2731202,
2731548-2732357,2732450-2732498,2733157-2733266,
2733381-2733488,2733920-2733980
Length = 582
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 167 PNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEP 69
P +IP+ P P V PPE +Q++RP+ P
Sbjct: 517 PPVLIPVPGAGPLGPFVPAPPEVVMQMMRPVMP 549
>06_03_0543 + 21967787-21970261
Length = 824
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +1
Query: 10 AVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLT---IGSGGSRQLIGITS-FGSAQ 177
+V +R + N++ C DG + G L GSGGS+ L+G T F A
Sbjct: 559 SVISRIYHTNLVRVWGFCSDGPHRILVSEFVENGSLDKILFGSGGSQNLLGWTQRFNIAL 618
Query: 178 GCQRG 192
G +G
Sbjct: 619 GVAKG 623
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -2
Query: 230 ELKDVTLAKPAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPSTQR 57
E +TL K PL P P+ V P + PP P R PP +PL +R PS R
Sbjct: 103 EALTITLPKKTPSPL-TPSPTPSPVTPPP-QQPPQPEPRRPPAAPLPGVR-TPPSPPR 157
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -2
Query: 203 PAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRP 78
PA P Q A P IP+ PP V+ PP P+QV P
Sbjct: 65 PAPSPQQQRVASPPPTIPVKFS-PPAAPVKVPPPPPVQVPPP 105
>01_05_0208 -
19291953-19292552,19293027-19293134,19293231-19293344,
19293464-19293573,19293720-19293808,19293942-19294138,
19294241-19294402,19294501-19294619,19294739-19294826,
19294911-19295016,19295157-19295245,19295351-19295503,
19295631-19295723,19295823-19295889,19296217-19296329,
19296453-19296548,19297963-19298139
Length = 826
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 79 GRSTCSGDSGGPLTIGSGGSRQL--IGITSFGSAQGCQRGHPAGFARVTSFNSWIRA 243
G SG++G +T+ GG + + + SFG +G G+ G ++ ++ A
Sbjct: 739 GAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAA 795
>09_04_0660 -
19286653-19287271,19287791-19287916,19288016-19288221,
19288417-19288549,19288632-19288713,19288906-19289035,
19289187-19289279,19289391-19289510,19289594-19289660,
19290079-19290137,19290719-19290943
Length = 619
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 82 RSTCSGDSGGPL--TIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFN 228
RS SG GG + +G GGS L T+ R GF ++T+FN
Sbjct: 525 RSRYSGAVGGTIHAVVGGGGSH-LSNFTAEAPPWSVYREMDYGFVKLTAFN 574
>06_03_0757 + 24267599-24268882
Length = 427
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 70 GSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWI 237
G+ GR +G G + G GG+RQ S G G G GF+ S W+
Sbjct: 293 GNGGRGGGNGGGNGGGSGGGGGTRQAF---SGGGGSGVSSG-GGGFSAGGSSTGWV 344
>06_03_0704 + 23706318-23707024,23707093-23707222
Length = 278
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 70 GSNGRSTCSGDSGGPLTIGSGGSR 141
G GR C+G GG G GG R
Sbjct: 126 GGGGRKVCNGGGGGSGGKGDGGRR 149
>05_05_0136 -
22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 67 DGSNGRSTCSGDSGG-PLTIGSGG--SRQLIGITSFGSAQG 180
DG G S+C D GG P G GG R + + + G+ +G
Sbjct: 85 DGDGG-SSCESDGGGSPRRCGGGGRFQRMVAAVAADGAEEG 124
>03_02_0337 + 7594259-7594319,7594455-7595205,7596323-7596509
Length = 332
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 49 ASTLCVDGSNGRSTC-SGDSG-GPLTIGSGGS 138
A TLC + + G+ TC +GD G G + GG+
Sbjct: 77 ARTLCAEDATGKFTCATGDCGSGGIQCNGGGA 108
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 135 KPSTDRYHIVRISSRLPERPP 197
+P +HI+ I S +P RPP
Sbjct: 340 QPEISSFHIIAIDSGVPRRPP 360
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 73 SNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGF 207
+ G + G GGP G GG R G G +G G P GF
Sbjct: 3 NGGGNPRGGGGGGPRGFGGGGPRGFGG----GGPRGFGGGGPRGF 43
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 28 FGNNVIIASTLCVDGSNGRSTCSGDS---GGPLTIGSG-GSRQLIGITSFGSAQGCQRGH 195
+ NN S+ G+ G+ + D GGP T G G G+ +G+ + G G G
Sbjct: 322 YPNNPTNMSSFAPSGTGGQMGITSDGINWGGP-TPGHGMGNISSLGLANLGRGAGDSFGL 380
Query: 196 PAG 204
P+G
Sbjct: 381 PSG 383
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +1
Query: 49 ASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSF 225
AS VDG+NG T + + G +G T G Q ++G GF + +F
Sbjct: 356 ASLTKVDGNNGADTAEAGISRAEPVPTNGKDLAMGSTDNGQPQRVRKGR--GFTQQYAF 412
>06_03_1471 + 30374988-30375959
Length = 323
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +1
Query: 7 NAVCARTFGNNVIIASTLCVDGSNGRSTCSGD--SGGPLTIGSGGSRQLIGITS 162
N +C +G ST GS +S CSG GGP GG + I S
Sbjct: 34 NCLCCSQYG---WCGSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVS 84
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 161 DVIPIS*RLPPLPMVRGPPESPLQVLRPLEP 69
+ PIS + PP P+ PP P+QV P P
Sbjct: 2 EATPISVK-PPSPVAAAPPPPPVQVPVPPPP 31
>05_03_0394 -
13440871-13441098,13441197-13441394,13441491-13441594,
13441687-13442551,13442677-13443045,13443372-13443533,
13443838-13444056,13444138-13444656,13444742-13444819,
13446041-13446163
Length = 954
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 135 KPSTDRYHIVRISSRLPERPPCRLRQSH 218
+P ++Y I RI RPPC L++ +
Sbjct: 80 RPQAEKYGICRIVPPSSWRPPCSLKEKN 107
>02_02_0327 - 8983983-8985878
Length = 631
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +1
Query: 61 CVDGSNGRST-CSGDSGGPLTIGSGGSRQLIGITSFGSAQG----CQRGH 195
C + GR+ C G GG SG + G T+F A G C GH
Sbjct: 449 CTKSARGRTDRCVGHGGGKRCQSSGCDKSAQGSTNFCKAHGGGKRCLWGH 498
>09_06_0366 +
22596192-22596392,22599777-22599875,22599962-22600411,
22600630-22601154
Length = 424
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 273 ESLVIRQLNSSPDPGVEGCDSGEAGRVA 190
+ LVI+ L+ S DP + GE GR A
Sbjct: 84 DKLVIQVLDDSTDPAIREMVEGECGRWA 111
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 61 CVDGSNGRSTCSGDSGGPL-TIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFN 228
CV G R SG G + + GG L TS R GF ++T+FN
Sbjct: 553 CVSGERRRY--SGTMNGTIFVVAGGGGSHLSDYTSAIPKWSVFRDRDFGFVKLTAFN 607
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 173 ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPS 66
AD N++ P+ PPLP+ PP PL P PS
Sbjct: 1117 ADQNELPPLPDGPPPLPL-DAPPPPPLPEGPPPLPS 1151
>06_03_1153 - 28047125-28047751
Length = 208
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 64 VDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGC 183
+DGS+ T GD GG + GG + G S A+ C
Sbjct: 168 LDGSSSIGTNGGDIGGNDDLYGGGGNESFGAAS--DAEAC 205
>05_05_0356 - 24373879-24374469
Length = 196
Score = 25.8 bits (54), Expect = 6.7
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +1
Query: 70 GSNGRSTCSGDS--GGPLTIGS-GGSRQLIGITSFGS--AQGCQRG 192
GS G SG S GG +IGS GGSR G +S GS A G + G
Sbjct: 103 GSRGGGVSSGGSSRGGGSSIGSGGGSRGSGGGSSSGSRGAGGTESG 148
>02_05_0646 - 30598769-30599293
Length = 174
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 140 RLPPLPMVRGPPESPLQVLRPLEPSTQRV 54
R PP P V P +SPL + R EP RV
Sbjct: 20 RSPP-PAVLDPSQSPLSLEREAEPELIRV 47
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = -2
Query: 203 PAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNV 24
PAG W + P R PP VR PP P P R+E ++ + P+
Sbjct: 4 PAGLLPWPAPSAARLAAPTRTRPPPRTRVRPPPPP-----APPPPPPPRLEPVVVVAPST 58
Query: 23 RAQTA 9
TA
Sbjct: 59 TTATA 63
>01_06_0959 -
33362810-33363125,33363309-33363475,33363583-33364410,
33364483-33364719,33365455-33365871,33365951-33366412,
33367197-33367382
Length = 870
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 58 LCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIG 153
L DG++ S S D GP+ G+ G+ IG
Sbjct: 140 LACDGTSTGSLISNDGNGPVPNGANGTLHNIG 171
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +1
Query: 37 NVIIASTLCVDGSNGRSTCS--GDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAG 204
+V+ AST C G +G GG L IG GG +G+ G G G G
Sbjct: 173 DVVGASTACGGGGDGGGGGEFWTSGGGGLAIGGGGDGVGLGLGLDGGGGGGFTGGRGG 230
>01_01_0073 + 555485-556315
Length = 276
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 70 GSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAG 204
G G + G GG T GG G T+ G A G + G +G
Sbjct: 171 GDGGGNVADGVGGGDATGTGGGGTVAGGGTATGGAGGGEGGGESG 215
>11_01_0198 -
1556215-1556298,1556412-1556580,1556666-1556921,
1557000-1557114,1557191-1557441,1557565-1557892,
1558197-1558358,1558846-1558985,1559325-1559436,
1560028-1560200,1560411-1560506,1560687-1560930
Length = 709
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = +2
Query: 197 LPASPESHPSTPGSGLEF----N*RMTNDSIIK 283
+PA SHP + G+G EF N +TN+ ++K
Sbjct: 142 VPAPRNSHPQSSGAGDEFLVVHNGIITNNEVLK 174
>10_08_0648 + 19579299-19580618
Length = 439
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 184 QRGHPAGFARVTSFN 228
Q+GHP G RV +FN
Sbjct: 387 QQGHPDGLVRVVNFN 401
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 140 RLPPLPMVRGPPESPLQVLRPLEPSTQRV 54
RLPP P PP PL+ P PST ++
Sbjct: 24 RLPPPPPPHPPPPPPLE---PAPPSTPQL 49
>10_08_0236 + 16078162-16078731
Length = 189
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 70 GSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQG 180
GSNG +G SG G GGS Q G +++GS G
Sbjct: 62 GSNGAHATAGGSG-----GGGGSSQ-YGGSAYGSGNG 92
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 73 SNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSW 234
SNG G+S G GG Q G S GS G G +G++ N+W
Sbjct: 101 SNGEGGYGGESDAGGGGGGGGQGQAGGYGSTGSGSG--SGSGSGYSNAN--NNW 150
>08_02_0839 + 21693348-21694853
Length = 501
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 152 PIS*RLPPLPMVRGPPESPLQVLRPLEPSTQRV 54
P+ LP LP PP+ PL L+P P + V
Sbjct: 20 PLQLPLPYLPPPPPPPQPPLLQLQPPPPPSSPV 52
>08_01_0134 + 1067826-1068158
Length = 110
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 134 PPLPMVRGPPESPLQVLRPLEP 69
PPLP R PP PL P P
Sbjct: 3 PPLPSSRPPPPPPLPRPHPAPP 24
>06_03_1326 - 29355467-29355817
Length = 116
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 70 GSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQG 180
G GRS G GG G GGS + G S G A G
Sbjct: 30 GGGGRSGGGGGGGGGKGGGEGGSGKYGGGYSGGHAGG 66
>05_01_0204 - 1461676-1462033,1462173-1462240
Length = 141
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 85 STCSGDSGGPLTIGSGGS-RQLIGITSFGSAQGCQRGH 195
S+ + D+ G + G GG R+ G+ FG+ + GH
Sbjct: 34 SSSARDTAGMVVAGGGGGYRRRRGVVRFGAIDDARFGH 71
>03_06_0037 + 31222963-31223886,31225172-31225786
Length = 512
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 109 GPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNS 231
GP+ GSR+ + ++S G A+ C H FA F S
Sbjct: 71 GPVFSLRLGSRRAVVVSSPGCARECFTEHDVAFANRPRFES 111
>02_05_0185 + 26562545-26562685,26563354-26563452
Length = 79
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 64 VDGSNGRSTCSGDSGGPLTIGSGGSRQLI 150
V GS G +G SGG L GGS L+
Sbjct: 22 VTGSGGPGLLTGRSGGSLGGSGGGSTDLM 50
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 193 HPAGFARVTSFNSWIRARI*LTND 264
+P+G + S N+W+ AR+ LT++
Sbjct: 2589 NPSGSSASASLNTWLTARLALTSE 2612
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 224 KDVTLAKPAGWPLWQP*ADPNDVIPIS*-RLPPLPMVRGPPESPLQVLRPLEP 69
K T +PA P P P V P+ + PP P + PP P Q+ + P
Sbjct: 225 KPPTALRPAIPPAAMP--KPPSVAPVQPPQRPPAPATKPPPSFPPQLAPTMPP 275
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,889,378
Number of Sequences: 37544
Number of extensions: 178765
Number of successful extensions: 980
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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