Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29p01
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50006-4|CAA90297.2|  316|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    29   4.9  
AL031633-22|CAB97238.1|  512|Caenorhabditis elegans Hypothetical...    28   6.5  
AJ582072-1|CAE46542.1|  512|Caenorhabditis elegans flavin monoox...    28   6.5  
U50191-7|AAK31555.2|  454|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z50006-4|CAA90297.2|  316|Caenorhabditis elegans Hypothetical
           protein T07C5.3 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 669 QTFENDTGFLHLYVYFDPRKAP 734
           QT+EN   +L LY YF P K P
Sbjct: 283 QTYENILKYLSLYQYFHPDKQP 304


>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 237 SAFGSVRHLSLSYLSEPCIRVDSC 308
           S FGS +H S+   S  C+ VD C
Sbjct: 103 SIFGSAKHSSIGVFSITCLMVDKC 126


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 237 SAFGSVRHLSLSYLSEPCIRVDSC 308
           S FGS +H S+   S  C+ VD C
Sbjct: 103 SIFGSAKHSSIGVFSITCLMVDKC 126


>AL031633-22|CAB97238.1|  512|Caenorhabditis elegans Hypothetical
           protein Y39A1A.19 protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 386 YQYFLMTLSRSTIVN--KPTLQTIDFPKRIELANSYYNFFGYHFFNLLRSVHTVTSYCNF 559
           Y+  L T+ +ST++N  K      DFP    +AN  +N     + N     H +  Y  F
Sbjct: 50  YKTELSTVMKSTVINTSKEMTSFSDFPPEDTMANFMHNTEMCRYLNNYAKHHELLKYIKF 109


>AJ582072-1|CAE46542.1|  512|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 386 YQYFLMTLSRSTIVN--KPTLQTIDFPKRIELANSYYNFFGYHFFNLLRSVHTVTSYCNF 559
           Y+  L T+ +ST++N  K      DFP    +AN  +N     + N     H +  Y  F
Sbjct: 50  YKTELSTVMKSTVINTSKEMTSFSDFPPEDTMANFMHNTEMCRYLNNYAKHHELLKYIKF 109


>U50191-7|AAK31555.2|  454|Caenorhabditis elegans Hypothetical
           protein T14B4.9 protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = -2

Query: 357 FYFICLIDICVNVLLYSSCPRVYMAHSSRRETDV 256
           F+F+ L  +   ++++S  PR+ M+  + +ET++
Sbjct: 9   FFFLLLTMLVCTIVIFSMAPRITMSFWTSKETNI 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,699,859
Number of Sequences: 27780
Number of extensions: 338034
Number of successful extensions: 754
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)