Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29o23
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein FL... 91 3e-18
BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein FL... 91 3e-18
AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens ... 91 3e-18
X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein. 61 3e-09
L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein p... 61 3e-09
BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair cross-c... 61 3e-09
AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair cross-c... 61 3e-09
AL157769-7|CAI14529.1| 142|Homo sapiens excision repair cross-c... 61 3e-09
AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair cross-c... 61 3e-09
AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein... 61 3e-09
AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum c... 61 3e-09
AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum c... 61 3e-09
X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum gro... 58 2e-08
D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein. 58 2e-08
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp... 39 0.014
X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein. 36 0.13
L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein. 36 0.13
CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein. 36 0.13
BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific... 36 0.13
BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific... 36 0.13
AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific... 36 0.13
AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein. 36 0.13
BC115415-1|AAI15416.1| 522|Homo sapiens C21orf29 protein protein. 32 2.1
BC021197-1|AAH21197.2| 583|Homo sapiens C21orf29 protein protein. 32 2.1
AJ487962-1|CAD32309.1| 669|Homo sapiens TSP-EAR protein protein. 32 2.1
AF255433-1|AAF89177.1| 67|Homo sapiens xeroderma pigmentosum c... 31 2.8
BC111762-1|AAI11763.1| 496|Homo sapiens UBAP2 protein protein. 31 3.8
AY358682-1|AAQ89045.1| 363|Homo sapiens UBAP2 protein. 31 3.8
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 31 3.8
AL139113-9|CAM13517.1| 325|Homo sapiens ubiquitin associated pr... 31 3.8
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 31 3.8
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 31 3.8
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 31 3.8
BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein. 31 5.0
BC001539-1|AAH01539.1| 266|Homo sapiens dickkopf homolog 1 (Xen... 31 5.0
AY359005-1|AAQ89364.1| 266|Homo sapiens DKK1 protein. 31 5.0
AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein. 31 5.0
AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein. 31 5.0
AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein. 31 5.0
AF261158-1|AAG15544.1| 266|Homo sapiens dickkopf homolog 1 prot... 31 5.0
AF177394-1|AAF02674.1| 266|Homo sapiens dickkopf-1 protein. 31 5.0
AF127563-1|AAD21087.1| 266|Homo sapiens Sk/Dkk-1 protein precur... 31 5.0
AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein. 31 5.0
AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein. 31 5.0
AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein. 31 5.0
AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein. 31 5.0
AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein. 31 5.0
AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein. 31 5.0
AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein. 31 5.0
AB020315-1|BAA34651.1| 266|Homo sapiens Dickkopf-1 (hdkk-1) pro... 31 5.0
D25284-1|BAA04972.1| 391|Homo sapiens alternative spliced produ... 30 6.6
>BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 91.1 bits (216), Expect = 3e-18
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQP-KLYLRNLFFRT 456
MG+ LW +L P + L L G+TIAVDLS WVC++Q V + K +LRNLFFR
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
Query: 457 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKN 636
YL ++ +FV+EG+ P+LK DV++ RN ++ G++ +S S+K R FK+
Sbjct: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKS 112
Query: 637 VLKE 648
VL+E
Sbjct: 113 VLRE 116
>BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 91.1 bits (216), Expect = 3e-18
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQP-KLYLRNLFFRT 456
MG+ LW +L P + L L G+TIAVDLS WVC++Q V + K +LRNLFFR
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
Query: 457 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKN 636
YL ++ +FV+EG+ P+LK DV++ RN ++ G++ +S S+K R FK+
Sbjct: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKS 112
Query: 637 VLKE 648
VL+E
Sbjct: 113 VLRE 116
>AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens
cDNA FLJ16464 fis, clone BRHIP2012360. ).
Length = 908
Score = 91.1 bits (216), Expect = 3e-18
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQP-KLYLRNLFFRT 456
MG+ LW +L P + L L G+TIAVDLS WVC++Q V + K +LRNLFFR
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60
Query: 457 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKN 636
YL ++ +FV+EG+ P+LK DV++ RN ++ G++ +S S+K R FK+
Sbjct: 61 SYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKS 112
Query: 637 VLKE 648
VL+E
Sbjct: 113 VLRE 116
>X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein
protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AL157769-7|CAI14529.1| 142|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 142
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein
ERCC5 protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 1186
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 232
Score = 61.3 bits (142), Expect = 3e-09
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum group
G complementing factor protein.
Length = 88
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H +L LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVM 534
R LL I PIFV +GDAP LK+ +
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTL 88
>D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein.
Length = 1185
Score = 58.4 bits (135), Expect = 2e-08
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDS-QNVTEHHVQP--KLYLRNLFF 450
MG++GLW +L + S L G+ +AVD+S W+ + + V + H + LF
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHPLTLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 627
R LL I PIFV +GDAP LK+ + R R S+ ++EKL KR
Sbjct: 61 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
complementing XP-G cells variant protein.
Length = 1611
Score = 39.1 bits (87), Expect = 0.014
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLP 609
+L LF R LL I PIFV +GDAP LK+ + R R S+ ++EKL
Sbjct: 479 HLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLL 535
Query: 610 NVSRKR 627
KR
Sbjct: 536 KTFLKR 541
>X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 606
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 607 PNVSRKRFKNVLKEFVD 657
KR V K+ D
Sbjct: 123 VEKFTKRLVKVTKQHND 139
>BC115415-1|AAI15416.1| 522|Homo sapiens C21orf29 protein protein.
Length = 522
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 662 TASTNSFKTFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPS 498
T + S K +L++ LGSF L Q+F GAA +W F++ L+ S S
Sbjct: 348 TFNGTSTKVHSHLYIRLLGSFQLFQSFPTFGAA--DWEVFQIGERIFLAVANSHS 400
>BC021197-1|AAH21197.2| 583|Homo sapiens C21orf29 protein protein.
Length = 583
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 662 TASTNSFKTFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPS 498
T + S K +L++ LGSF L Q+F GAA +W F++ L+ S S
Sbjct: 480 TFNGTSTKVHSHLYIRLLGSFQLFQSFPTFGAA--DWEVFQIGERIFLAVANSHS 532
>AJ487962-1|CAD32309.1| 669|Homo sapiens TSP-EAR protein protein.
Length = 669
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 662 TASTNSFKTFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPS 498
T + S K +L++ LGSF L Q+F GAA +W F++ L+ S S
Sbjct: 495 TFNGTSTKVHSHLYIRLLGSFQLFQSFPTFGAA--DWEVFQIGERIFLAVANSHS 547
>AF255433-1|AAF89177.1| 67|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 67
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW 381
MG++GLW +L + S L G+ +AV+ S W
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVETSQW 34
>BC111762-1|AAI11763.1| 496|Homo sapiens UBAP2 protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 357 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 415
Query: 464 RYT 456
YT
Sbjct: 416 TYT 418
>AY358682-1|AAQ89045.1| 363|Homo sapiens UBAP2 protein.
Length = 363
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 201 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 259
Query: 464 RYT 456
YT
Sbjct: 260 TYT 262
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 530 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 588
Query: 464 RYT 456
YT
Sbjct: 589 TYT 591
>AL139113-9|CAM13517.1| 325|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 325
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 163 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 221
Query: 464 RYT 456
YT
Sbjct: 222 TYT 224
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 530 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 588
Query: 464 RYT 456
YT
Sbjct: 589 TYT 591
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 8 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 66
Query: 464 RYT 456
YT
Sbjct: 67 TYT 69
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 638 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 465
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 168 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 226
Query: 464 RYT 456
YT
Sbjct: 227 TYT 229
>BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>BC001539-1|AAH01539.1| 266|Homo sapiens dickkopf homolog 1
(Xenopus laevis) protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 489 ICIGRRCTRTQKRCNGYSKCCPISWCRTQI 578
IC+ C + +KRC ++ CCP ++C+ I
Sbjct: 110 ICLA--CRKRRKRCMRHAMCCPGNYCKNGI 137
>AY359005-1|AAQ89364.1| 266|Homo sapiens DKK1 protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 489 ICIGRRCTRTQKRCNGYSKCCPISWCRTQI 578
IC+ C + +KRC ++ CCP ++C+ I
Sbjct: 110 ICLA--CRKRRKRCMRHAMCCPGNYCKNGI 137
>AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein.
Length = 135
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF261158-1|AAG15544.1| 266|Homo sapiens dickkopf homolog 1
protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 489 ICIGRRCTRTQKRCNGYSKCCPISWCRTQI 578
IC+ C + +KRC ++ CCP ++C+ I
Sbjct: 110 ICLA--CRKRRKRCMRHAMCCPGNYCKNGI 137
>AF177394-1|AAF02674.1| 266|Homo sapiens dickkopf-1 protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 489 ICIGRRCTRTQKRCNGYSKCCPISWCRTQI 578
IC+ C + +KRC ++ CCP ++C+ I
Sbjct: 110 ICLA--CRKRRKRCMRHAMCCPGNYCKNGI 137
>AF127563-1|AAD21087.1| 266|Homo sapiens Sk/Dkk-1 protein precursor
protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 489 ICIGRRCTRTQKRCNGYSKCCPISWCRTQI 578
IC+ C + +KRC ++ CCP ++C+ I
Sbjct: 110 ICLA--CRKRRKRCMRHAMCCPGNYCKNGI 137
>AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein.
Length = 803
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein.
Length = 846
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein.
Length = 803
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein.
Length = 846
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein.
Length = 800
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 30.7 bits (66), Expect = 5.0
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHV---QPKLYLRNLFF 450
MGI+GL + SE + + +G+ +AVD W+ + +P
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 451 RTVYLLLAE-INPIFVLEGDAPELKRDVMATR 543
+ V +LL+ I PI V +G K++V +R
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSR 92
>AB020315-1|BAA34651.1| 266|Homo sapiens Dickkopf-1 (hdkk-1)
protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 489 ICIGRRCTRTQKRCNGYSKCCPISWCRTQI 578
IC+ C + +KRC ++ CCP ++C+ I
Sbjct: 110 ICLA--CRKRRKRCMRHAMCCPGNYCKNGI 137
>D25284-1|BAA04972.1| 391|Homo sapiens alternative spliced product
of galactocerebrosidase protein.
Length = 391
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 401 LRNTMSNRNYILETCSSERCICYWLK*ILYLYWK 502
L + + N I+ET + C CYW+ +LY YWK
Sbjct: 357 LTDGLGNLTIIIETMVNF-CCCYWINSLLY-YWK 388
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,633,985
Number of Sequences: 237096
Number of extensions: 2008142
Number of successful extensions: 3350
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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