Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29o23
(671 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128475-1|AAM75068.1| 726|Drosophila melanogaster RE33588p pro... 141 7e-34
AF160893-1|AAD46833.1| 726|Drosophila melanogaster GM10765p pro... 141 7e-34
AE014296-935|AAF50805.1| 726|Drosophila melanogaster CG10670-PA... 141 7e-34
AB103508-1|BAC57447.1| 726|Drosophila melanogaster xpg like end... 141 7e-34
BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p pro... 59 6e-09
AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant nucle... 59 6e-09
AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein. 59 6e-09
AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide e... 59 6e-09
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 59 6e-09
AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-P... 59 6e-09
AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-P... 59 6e-09
AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant ... 38 0.009
AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-P... 38 0.009
AL031863-6|CAA21320.1| 385|Drosophila melanogaster EG:EG0003.3 ... 38 0.016
AE013599-2356|AAF57944.1| 385|Drosophila melanogaster CG8648-PA... 38 0.016
AY075178-1|AAL68048.1| 326|Drosophila melanogaster AT12771p pro... 31 1.1
AE014134-2093|AAF53119.1| 326|Drosophila melanogaster CG14936-P... 31 1.1
X89022-1|CAA61431.1| 732|Drosophila melanogaster Tosca protein. 31 1.9
X89021-1|CAA61430.1| 732|Drosophila melanogaster Tosca protein. 31 1.9
AY051794-1|AAK93218.1| 732|Drosophila melanogaster LD31018p pro... 31 1.9
AE014134-2957|AAF53687.1| 732|Drosophila melanogaster CG10387-P... 31 1.9
>AY128475-1|AAM75068.1| 726|Drosophila melanogaster RE33588p
protein.
Length = 726
Score = 141 bits (342), Expect = 7e-34
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQPKLYLRNLFFRTV 459
MG+K LW VLTP E+K ++ELRG+ +A+DL+GWVC+S NV ++ V P+ +L+NLFFRT
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRTC 60
Query: 460 YLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC--SSEKLPNVSRKRFK 633
YL+ ++ P+FVLEG AP+LK V+A RN +QFRG P++ C S + R RF
Sbjct: 61 YLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSRFN 120
Query: 634 NVLKE 648
+VLK+
Sbjct: 121 HVLKQ 125
>AF160893-1|AAD46833.1| 726|Drosophila melanogaster GM10765p
protein.
Length = 726
Score = 141 bits (342), Expect = 7e-34
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQPKLYLRNLFFRTV 459
MG+K LW VLTP E+K ++ELRG+ +A+DL+GWVC+S NV ++ V P+ +L+NLFFRT
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRTC 60
Query: 460 YLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC--SSEKLPNVSRKRFK 633
YL+ ++ P+FVLEG AP+LK V+A RN +QFRG P++ C S + R RF
Sbjct: 61 YLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSRFN 120
Query: 634 NVLKE 648
+VLK+
Sbjct: 121 HVLKQ 125
>AE014296-935|AAF50805.1| 726|Drosophila melanogaster CG10670-PA
protein.
Length = 726
Score = 141 bits (342), Expect = 7e-34
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQPKLYLRNLFFRTV 459
MG+K LW VLTP E+K ++ELRG+ +A+DL+GWVC+S NV ++ V P+ +L+NLFFRT
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRTC 60
Query: 460 YLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC--SSEKLPNVSRKRFK 633
YL+ ++ P+FVLEG AP+LK V+A RN +QFRG P++ C S + R RF
Sbjct: 61 YLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSRFN 120
Query: 634 NVLKE 648
+VLK+
Sbjct: 121 HVLKQ 125
>AB103508-1|BAC57447.1| 726|Drosophila melanogaster xpg like
endonuclease protein.
Length = 726
Score = 141 bits (342), Expect = 7e-34
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGWVCDSQNVTEHHVQPKLYLRNLFFRTV 459
MG+K LW VLTP E+K ++ELRG+ +A+DL+GWVC+S NV ++ V P+ +L+NLFFRT
Sbjct: 1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRTC 60
Query: 460 YLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC--SSEKLPNVSRKRFK 633
YL+ ++ P+FVLEG AP+LK V+A RN +QFRG P++ C S + R RF
Sbjct: 61 YLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSRFN 120
Query: 634 NVLKE 648
+VLK+
Sbjct: 121 HVLKQ 125
>BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p
protein.
Length = 932
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant
nucleotide excision repairprotein mus201 protein.
Length = 725
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein.
Length = 1236
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide
excision repair proteinMUS201 protein.
Length = 1236
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-PC,
isoform C protein.
Length = 1236
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-PB,
isoform B protein.
Length = 1236
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW---VCDSQNVTEHHVQPKLYLRNLFF 450
MG+ GLW ++ P + + L G+ +AVD+S W V + +L LF
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVDISIWLHQVVKGFQDNKGSALSNAHLLGLFH 60
Query: 451 RTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 RLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 91
>AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant
protein.
Length = 1257
Score = 38.3 bits (85), Expect = 0.009
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAV---------------------DLSGW---VC 387
MG+ GLW ++ P + + L G+ +AV D+S W V
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVGKHRFSPPNEILADWSTFRPADISIWLHQVV 60
Query: 388 DSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
+ +L LF R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 KGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 112
>AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-PA,
isoform A protein.
Length = 1257
Score = 38.3 bits (85), Expect = 0.009
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAV---------------------DLSGW---VC 387
MG+ GLW ++ P + + L G+ +AV D+S W V
Sbjct: 1 MGVTGLWKLIEPCGKPVPVETLEGKILAVGKHRFSPPNEILADWSTFRPADISIWLHQVV 60
Query: 388 DSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATR 543
+ +L LF R LL + P+F+ +G P+LKRD +A R
Sbjct: 61 KGFQDNKGSALSNAHLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARR 112
>AL031863-6|CAA21320.1| 385|Drosophila melanogaster EG:EG0003.3
protein.
Length = 385
Score = 37.5 bits (83), Expect = 0.016
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 421 PKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACS 594
P +L +F+RT+ LL I P++V +G P+LK +A R + R A ++ KA +
Sbjct: 60 PTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKR--AERREEAEKALKAAT 115
>AE013599-2356|AAF57944.1| 385|Drosophila melanogaster CG8648-PA
protein.
Length = 385
Score = 37.5 bits (83), Expect = 0.016
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 421 PKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACS 594
P +L +F+RT+ LL I P++V +G P+LK +A R + R A ++ KA +
Sbjct: 60 PTSHLMGMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKR--AERREEAEKALKAAT 115
>AY075178-1|AAL68048.1| 326|Drosophila melanogaster AT12771p
protein.
Length = 326
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 666 DNCIDEFL*NIFKSLSGNIRQFF---T*TSLLRSGCGTTKLDSISSSHYISFEFWCISFQ 496
D+C + FL + +S+ GN RQ F T S+ +GC + ++ + YI W ++ +
Sbjct: 190 DSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAFVSAVWNCFYILMALWVLALK 249
Query: 495 Y 493
+
Sbjct: 250 F 250
>AE014134-2093|AAF53119.1| 326|Drosophila melanogaster CG14936-PA
protein.
Length = 326
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 666 DNCIDEFL*NIFKSLSGNIRQFF---T*TSLLRSGCGTTKLDSISSSHYISFEFWCISFQ 496
D+C + FL + +S+ GN RQ F T S+ +GC + ++ + YI W ++ +
Sbjct: 190 DSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAFVSAVWNCFYILMALWVLALK 249
Query: 495 Y 493
+
Sbjct: 250 F 250
>X89022-1|CAA61431.1| 732|Drosophila melanogaster Tosca protein.
Length = 732
Score = 30.7 bits (66), Expect = 1.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW----VCDSQNVTEHHVQPKLYLRNLF 447
MGI GL + S + L ++RG T+AVD W V +Y++
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 448 FRTVYLLLAEINPIFVLEG 504
LL +I PI V +G
Sbjct: 61 KYVNMLLSYDIKPILVFDG 79
>X89021-1|CAA61430.1| 732|Drosophila melanogaster Tosca protein.
Length = 732
Score = 30.7 bits (66), Expect = 1.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW----VCDSQNVTEHHVQPKLYLRNLF 447
MGI GL + S + L ++RG T+AVD W V +Y++
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 448 FRTVYLLLAEINPIFVLEG 504
LL +I PI V +G
Sbjct: 61 KYVNMLLSYDIKPILVFDG 79
>AY051794-1|AAK93218.1| 732|Drosophila melanogaster LD31018p
protein.
Length = 732
Score = 30.7 bits (66), Expect = 1.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW----VCDSQNVTEHHVQPKLYLRNLF 447
MGI GL + S + L ++RG T+AVD W V +Y++
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 448 FRTVYLLLAEINPIFVLEG 504
LL +I PI V +G
Sbjct: 61 KYVNMLLSYDIKPILVFDG 79
>AE014134-2957|AAF53687.1| 732|Drosophila melanogaster CG10387-PA
protein.
Length = 732
Score = 30.7 bits (66), Expect = 1.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +1
Query: 280 MGIKGLWSVLTPFSEKKSLHELRGETIAVDLSGW----VCDSQNVTEHHVQPKLYLRNLF 447
MGI GL + S + L ++RG T+AVD W V +Y++
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 448 FRTVYLLLAEINPIFVLEG 504
LL +I PI V +G
Sbjct: 61 KYVNMLLSYDIKPILVFDG 79
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,422,890
Number of Sequences: 53049
Number of extensions: 618074
Number of successful extensions: 1296
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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