Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29n06
(747 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 26 0.33
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 26 0.33
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 26 0.33
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 25 0.75
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 7.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.3
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 9.3
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 26.2 bits (55), Expect = 0.33
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 57 QIT*PLCCTNQMICVWYKHRSLKYLK 134
+I LC T + I +W+++R +K+ K
Sbjct: 40 EIAHALCLTERQIKIWFQNRRMKWKK 65
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 26.2 bits (55), Expect = 0.33
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 57 QIT*PLCCTNQMICVWYKHRSLKYLK 134
+I LC T + I +W+++R +K+ K
Sbjct: 40 EIAHALCLTERQIKIWFQNRRMKWKK 65
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 26.2 bits (55), Expect = 0.33
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 57 QIT*PLCCTNQMICVWYKHRSLKYLK 134
+I LC T + I +W+++R +K+ K
Sbjct: 302 EIAHALCLTERQIKIWFQNRRMKWKK 327
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 57 QIT*PLCCTNQMICVWYKHRSLKYLK 134
+I LC T + I +W+++R +K K
Sbjct: 40 EIAHALCLTERQIKIWFQNRRMKLKK 65
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 627 APKALAVSMVRRPMGPAPSTSTTCPAETPP 538
AP L S + + + P P+ S C A P
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNP 449
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 627 APKALAVSMVRRPMGPAPSTSTTCPAETPP 538
AP L S + + + P P+ S C A P
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNP 449
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 600 VRRPMGPAPSTSTTCPAETPPL 535
V+ P+G ST +TC E L
Sbjct: 486 VKSPLGSVSSTESTCSGEVASL 507
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 592 PPYHAHS*SLWSTQSTHNRYP 654
PP+H H S Q H R P
Sbjct: 349 PPHHHHHHQTQSLQHLHYRQP 369
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/21 (33%), Positives = 8/21 (38%)
Frame = +3
Query: 510 SRWAFTRARGAESRRDTWCWY 572
S W A D WC+Y
Sbjct: 937 SSWVSDNAHKVVDASDVWCYY 957
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 393 SAPRPQYTETSSDI 434
S P PQY TSS I
Sbjct: 436 SQPSPQYPSTSSHI 449
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 245 HEASGVVAKIGSKVKNLTVGDRVAIEP 325
H A VVA S V N+T + P
Sbjct: 943 HSAQSVVASSASNVTNVTTNLTTILPP 969
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 631 VCSKGFSCEH 602
+CS G+ CEH
Sbjct: 373 ICSNGWICEH 382
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,612
Number of Sequences: 438
Number of extensions: 4803
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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