Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29n04
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 64 8e-11
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 62 3e-10
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.044
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 35 0.059
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 31 1.3
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 31 1.3
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 30 2.2
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 29 5.1
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 6.7
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 28 8.9
U42832-2|AAA83572.1| 558|Caenorhabditis elegans Udp-glucuronosy... 28 8.9
AL117195-18|CAB55029.1| 490|Caenorhabditis elegans Hypothetical... 28 8.9
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 64.5 bits (150), Expect = 8e-11
Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Frame = +2
Query: 128 RNARIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTLGSLS 307
R AR+VGG + G+ P A+ N ++ CG S+L ++TAAHC F
Sbjct: 23 RIARVVGGFETVPGAFPWTAALRNKA-TKAHHCGASILDKTHLITAAHC----FEEDERV 77
Query: 308 GNLRLTVG---TNQWNSGGSLHTVSRNITHPHYVSNTIKNDLGIL-ITSSNIVFNNRVRP 475
+ + VG NQ + + + R +P Y + +D+ IL I I FN +P
Sbjct: 78 SSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQP 136
Query: 476 ISL---SFDYVPGGVPVRVAGWGRVRANGALSTNLLEINVRTIDGQTCVRTAAQAAIDLN 646
I L F Y PG V V+GWG + A L + I+ CV ++Q ++
Sbjct: 137 ICLPSKDFVYTPGRQCV-VSGWGSMGLRYA--ERLQAALIPIINRFDCV-NSSQIYSSMS 192
Query: 647 VRAPPVEPHIELCTFHAE-GTGTCNGDSGSALA-RTDSGLQV--GIVSWG 784
A C + E G +C GDSG A R + G V G++SWG
Sbjct: 193 RSA--------FCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWG 234
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 62.5 bits (145), Expect = 3e-10
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 6/229 (2%)
Frame = +2
Query: 116 EHVDRNARIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTL 295
++V + R++GGS+++ S P V + + + CGGS++ VLTAAHC F
Sbjct: 50 DYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHR--CGGSLIDPNFVLTAAHC----FAK 103
Query: 296 GSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHY-VSNTIKNDLGILITSSNIVFNNRVR 472
+ + VG ++ + GS H V+ HP Y + D I+ + + R
Sbjct: 104 DRRPTSYSVRVGGHR-SGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTAR 162
Query: 473 PISL-SFDYVPGGVPVRVAGWGRVRANGALST-NLLEINVRTIDGQTCVRTAAQAAIDLN 646
PI L S V + V V GWG +LS L EI+V + C
Sbjct: 163 PICLPSLPAVENRLCV-VTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIG---R 218
Query: 647 VRAPPVEPHIELCTFHAEG-TGTCNGDSGSAL--ARTDSGLQVGIVSWG 784
+ P + LC ++ G +C GDSG L AR G+VSWG
Sbjct: 219 IHLPSM-----LCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWG 262
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.044
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +2
Query: 221 VCGGSVLTARSVLTAAHCIVAVFTLGSLSGNLRLTVG--TNQW---NSGGSLHTVSRN 379
+CGG+++T + VLTAAHC F G G W NS GSL RN
Sbjct: 61 ICGGTLITLKHVLTAAHCFQKHFGAKKEGGEENSMSGRYCESWVIYNSEGSLEIYFRN 118
Score = 31.9 bits (69), Expect = 0.55
Identities = 43/175 (24%), Positives = 62/175 (35%), Gaps = 8/175 (4%)
Frame = +2
Query: 284 VFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHYVSNTIK-NDLGILITSSNIVFN 460
V T+G++ L G G +SR Y ++ + ND+ IL S I
Sbjct: 131 VVTVGAMCTRLEQKYGCVNEKQNGKTLKISRFAIGDFYKTHCEQGNDIVILELESTIDDV 190
Query: 461 NRVRPISLSF---DYVPGGVPVRVAGWGRVRANGALSTNLLEINVRTIDGQTCVRTAAQA 631
L F + G V GWG G + I V T+ +T
Sbjct: 191 EGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQVLTLATETLATCEENW 250
Query: 632 AIDLNVRAPPVEPHIELCTFHAEGTGTCNGDSGSALA--RTDSGLQ--VGIVSWG 784
+ P CT E C+GDSG L ++DS + + IVS+G
Sbjct: 251 GTSI--------PFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYG 297
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 35.1 bits (77), Expect = 0.059
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Frame = +2
Query: 137 RIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTLGSLSGNL 316
RI+GG+ G++ ++ G + +CG +V+ ++TAAHC + + T
Sbjct: 37 RIIGGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRS------ 90
Query: 317 RLTVGTNQWNSGGSLHTVSRNITHPHYVSNTIKNDLGILITSSNIVFNNRVRPISLSFD- 493
N+ +V H Y + T ND+ +L SS++ ++P+ L D
Sbjct: 91 -FVYVREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDL-SKLGIKPVCLVHDD 148
Query: 494 -----YVPGGVPVRVAGWGRVRANGAL-------STNLLEINVRTIDGQTCVRTAAQAAI 637
GV V G+G + S L +V I CV+T ++
Sbjct: 149 SKLLKQYKNGV---VIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSL 205
Query: 638 DLNVRAPPVEPHIELCTFHAEGTGTCNGDSGSALARTDSG---LQVGIVSWG 784
L+V+ ++C A GT GDSG L S +Q+GI S+G
Sbjct: 206 -LSVKI----TGYQICA-GAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYG 251
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 54 WRSLRLPGPSPSLKMTCPSSTSMWTGTLVLWG 149
W ++ L G PS+ + PSS+S W+ V G
Sbjct: 16 WNNMSLSGIYPSISTSTPSSSSSWSSHFVFGG 47
>Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical
protein C02B4.2 protein.
Length = 396
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 788 ESPTTRCRL-GDRCRSEPMRCHCHHCKY-QFLLRGMCRARYEVRQ 660
E+ T C+ GD + MRC C HC+Y + ++ GM R + +
Sbjct: 61 ENRTYSCKNNGDCIIDKSMRCSCRHCRYKKCIIAGMDRGELSMER 105
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 54 WRSLRLPGPSPSLKMTCPSSTSMWTGTLVLWG 149
W ++ L G PS+ + PSS+S W+ V G
Sbjct: 16 WNNMSLSGIYPSISTSTPSSSSSWSSHFVFGG 47
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -1
Query: 725 CHHCKYQFLLRGMCRARYEVRQEEPSR*GQWPPGPQ---SSRKSDHQ 594
CH+C QF RG + + E QW G Q SS KS H+
Sbjct: 279 CHYCTRQFSQRGALKTHMRLHTGERPFVCQWECGKQFASSSAKSHHE 325
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -1
Query: 773 RCRLGDRCRSEPMRCHCHHCKYQFLLRGMCRARYEVRQEEPSR*GQWPPGPQSSRKSDHQ 594
RC++ C +EP + H KY+F+ MC R+ +PS+ G W P + +
Sbjct: 219 RCQI-TTC-TEPFQIVLCHPKYEFM--NMCSFLLAPRRGQPSQEGVWIPREIAKQLEREN 274
Query: 593 WFSH*SPEDS 564
F +DS
Sbjct: 275 GFERNDYDDS 284
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -2
Query: 226 ADKAPDEDTISHCYHMGVAALSCLATPHNTSVPVHMLVEDGHVIFRLGEGPGSRKERHKK 47
A+ P ++ I+ G + T + PVH+ +IF+ GE P +R+E +KK
Sbjct: 50 ANGVPTQEIINVYDKWGNGQFGVILTGNVQVSPVHLEAPGNAMIFKEGETP-ARREAYKK 108
Query: 46 YS 41
++
Sbjct: 109 WA 110
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 98 DMSIFYEHVDRNARIVGGSQAAQGSHPHMVA--MTNGIFIRSFVCGGSVLTARSVLTAAH 271
+M +++ + +A++ G A+Q P V + + + C G++++ R +L A H
Sbjct: 149 EMILYWLRIPFSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATH 208
Query: 272 C 274
C
Sbjct: 209 C 209
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 662 VEPHIELCTFHAEGTGTCNGDSGSALARTDSGLQVGIVSWGF 787
+EPH++ C F+ +GT C+ +++ + + + +VS GF
Sbjct: 571 IEPHLKTCGFNEQGTFKCD----MSISEVFTQIPIVLVSAGF 608
>U42832-2|AAA83572.1| 558|Caenorhabditis elegans
Udp-glucuronosyltransferase protein57 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 327 TVRRRFPERLPSVNTATMQ*AAVSTERAVSTEPPQTKLLMKIPL 196
T+++RF + P+VNT Q AA EPP+ L IP+
Sbjct: 243 TIKKRF-KNFPNVNTLKQQSAAYFVNTDPLLEPPRALPLNVIPV 285
>AL117195-18|CAB55029.1| 490|Caenorhabditis elegans Hypothetical
protein Y57A10A.25 protein.
Length = 490
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 794 ARESPTTRCRLGDRCRSEPMRCHCHHCKYQFLLRGMCRAR 675
A ES R G + P+ H H CKY F G C AR
Sbjct: 276 ATESVDVRLPEGFPDHAIPIDLHIHVCKY-FAYHGFCHAR 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,746,803
Number of Sequences: 27780
Number of extensions: 437443
Number of successful extensions: 1470
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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